Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU6-158P-201ENST00000517104 100 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AC068631.3-201ENST00000538831 225 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 OR5BK1P-201ENST00000550421 823 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RN7SL835P-201ENST00000579920 262 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 RN7SL178P-201ENST00000582930 304 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 SNORD115-40-201ENST00000606510 82 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 MIR2052-201ENST00000636055 55 ntBASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
MS4A3Q96HJ5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AL513302.2-201ENST00000562313 1842 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 RNY1P10-201ENST00000363268 113 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 SNORD32A-201ENST00000364805 84 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 MIR301B-201ENST00000390813 78 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 RNU6-882P-201ENST00000391025 103 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 FTH1P6-201ENST00000430768 320 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC243964.1-201ENST00000441814 261 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC079944.1-201ENST00000485426 495 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 ENPP7P3-201ENST00000509123 241 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC083906.1-201ENST00000509298 406 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AL590808.1-201ENST00000618696 141 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AL590065.1-201ENST00000603371 4774 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 AC006116.1-201ENST00000587908 2171 ntBASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
MS4A3Q96HJ5 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RN7SKP257-201ENST00000364525 309 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RNA5SP396-201ENST00000364834 120 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RNU6-1134P-201ENST00000365156 101 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 ARMCX7P-201ENST00000372828 562 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RNU6-1014P-201ENST00000383940 103 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RN7SKP236-201ENST00000410635 284 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RNU6-1245P-201ENST00000411130 106 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RN7SL688P-201ENST00000471754 275 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC093870.1-201ENST00000506837 213 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 MIR4786-201ENST00000583954 80 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AL031274.2-201ENST00000599419 203 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RNU6-94P-201ENST00000607728 107 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 MIR6731-201ENST00000614863 72 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 AC127024.6-201ENST00000621598 424 ntBASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.43□□□□□ -1.38
MS4A3Q96HJ5 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms