Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS3Q969F9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS3Q969F9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS3Q969F9 AC121334.2-201ENST00000605387 271 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 MLECP1-201ENST00000615893 709 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 RMST_9.1-201ENST00000619945 193 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC002550.2-201ENST00000621246 394 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HPS3Q969F9 LARP1BP1-201ENST00000506036 1359 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC095050.2-201ENST00000510748 1458 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC106871.1-201ENST00000568324 3102 ntBASIC4.61□□□□□ -1.67
HPS3Q969F9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS3Q969F9 FARSBP1-201ENST00000435808 1778 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC090337.1-201ENST00000579651 2074 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC009902.3-201ENST00000606235 2172 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS3Q969F9 RNU2-8P-201ENST00000410727 190 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 RN7SKP33-201ENST00000410942 340 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 Y_RNA.619-201ENST00000410951 90 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.6□□□□□ -1.67
HPS3Q969F9 RPS3AP44-201ENST00000425466 790 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC010975.2-201ENST00000427781 588 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AL121877.1-201ENST00000453704 622 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC011825.1-201ENST00000484967 388 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC012170.1-201ENST00000495139 359 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AL139099.1-201ENST00000497398 403 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 NPM1P41-201ENST00000512920 831 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS3Q969F9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
HPS3Q969F9 SNORA18.6-201ENST00000516792 115 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AP003497.1-201ENST00000528472 562 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AP000907.2-201ENST00000530827 353 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.6□□□□□ -1.67
HPS3Q969F9 CR383656.7-201ENST00000548164 174 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 EIF1P4-201ENST00000572664 335 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 CKS1BP3-201ENST00000600888 237 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS3Q969F9 MIR6716-201ENST00000613413 80 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AC072046.2-201ENST00000618366 268 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC009159.1-201ENST00000618386 642 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AL356585.4-201ENST00000623078 1229 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 AC008785.1-201ENST00000624475 456 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 MIR3653-201ENST00000625572 110 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HPS3Q969F9 MTND5P33-201ENST00000571250 1450 ntBASIC4.6□□□□□ -1.67
HPS3Q969F9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HPS3Q969F9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.6□□□□□ -1.67
HPS3Q969F9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HPS3Q969F9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.6□□□□□ -1.67
HPS3Q969F9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HPS3Q969F9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.59□□□□□ -1.67
HPS3Q969F9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HPS3Q969F9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HPS3Q969F9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 RNA5SP513-201ENST00000364648 118 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 RNU6-1215P-201ENST00000384441 102 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 Y_RNA.599-201ENST00000410489 109 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 RNU2-47P-201ENST00000410649 186 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AF274854.1-201ENST00000413236 615 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 MTND4LP10-201ENST00000435146 291 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 Z74696.2-201ENST00000436514 498 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AL031667.1-201ENST00000440222 725 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC006011.1-201ENST00000442758 349 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 SNORD108-201ENST00000459332 71 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 RN7SL585P-201ENST00000470538 280 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC006517.1-201ENST00000480485 328 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC105137.1-201ENST00000484355 562 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC096751.1-202ENST00000502691 1067 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC138853.1-201ENST00000503549 823 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.59□□□□□ -1.67
HPS3Q969F9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC022616.6-201ENST00000520479 119 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.59□□□□□ -1.67
HPS3Q969F9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 RPL23AP87-202ENST00000573039 466 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.59□□□□□ -1.67
HPS3Q969F9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.59□□□□□ -1.67
HPS3Q969F9 AC068790.3-201ENST00000602988 553 ntBASIC4.59□□□□□ -1.67
HPS3Q969F9 AC244517.1-201ENST00000606030 2086 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms