Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AC002456.2-201ENST00000509356 380 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AC015795.1-201ENST00000513669 327 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AC123904.2-201ENST00000548059 300 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AP001330.5-201ENST00000607176 411 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AL136295.6-201ENST00000610486 658 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AL161616.1-201ENST00000611867 286 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AL020991.1-201ENST00000612314 373 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC009318.4-201ENST00000620496 486 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC4Q92889 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.94□□□□□ -1.62
ERCC4Q92889 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC4Q92889 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 CASC19-280ENST00000642102 1351 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC4Q92889 RNU6-853P-201ENST00000364306 107 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RNVU1-6-201ENST00000364688 164 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 Y_RNA.295-201ENST00000364918 102 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RPL31P1-201ENST00000398116 372 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 SNORA74C-2-201ENST00000411179 201 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AMD1P2-201ENST00000412936 992 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AC009237.5-201ENST00000414271 501 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AL590139.1-201ENST00000416267 400 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 USP9YP27-201ENST00000418455 438 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RPL36AP36-201ENST00000418616 301 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.93□□□□□ -1.62
ERCC4Q92889 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AC012498.1-201ENST00000424037 437 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AL590233.1-201ENST00000430017 456 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 FCF1P1-201ENST00000432690 571 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AL049734.2-201ENST00000441066 616 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RPL7P15-201ENST00000461190 712 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 RPL35AP15-201ENST00000468042 339 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 NUP58P1-201ENST00000502546 1738 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC4Q92889 Y_RNA.704-201ENST00000516851 102 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AL512360.1-201ENST00000555346 234 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 FGF7P1-201ENST00000582820 288 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AC060780.3-201ENST00000589464 80 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AL049634.3-201ENST00000604968 457 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 OR10AB1P-201ENST00000609613 938 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC4Q92889 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 AC010149.2-201ENST00000637608 315 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.93□□□□□ -1.62
ERCC4Q92889 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ERCC4Q92889 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.93□□□□□ -1.62
ERCC4Q92889 MTND5P33-201ENST00000571250 1450 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 AL122126.1-201ENST00000546905 1318 ntBASIC4.93□□□□□ -1.62
ERCC4Q92889 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ERCC4Q92889 RNU6-483P-201ENST00000384088 108 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 SSXP10-201ENST00000402595 565 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ERCC4Q92889 CYP4F29P-201ENST00000420685 446 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AL353193.1-201ENST00000421444 268 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AL592293.2-201ENST00000422292 996 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 MTND3P23-201ENST00000431980 347 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 UBE2V1P7-201ENST00000446395 340 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 RPL23AP20-201ENST00000447965 421 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AP1S2P1-201ENST00000457344 379 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AC093767.1-201ENST00000504523 156 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.92□□□□□ -1.62
ERCC4Q92889 RNU6-507P-201ENST00000516045 100 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AP003072.2-201ENST00000527756 676 ntBASIC4.92□□□□□ -1.62
ERCC4Q92889 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.92□□□□□ -1.62
ERCC4Q92889 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms