Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SNORA57.3-201ENST00000411095 141 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 RPS3AP3-201ENST00000411933 242 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 USP9YP18-201ENST00000425912 695 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC069285.2-201ENST00000440210 275 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AL353572.1-201ENST00000442490 417 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 RANP8-201ENST00000444720 713 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC003071.1-201ENST00000451219 789 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC010469.1-201ENST00000463864 576 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 RPL31P50-201ENST00000471002 296 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RTF1Q92541 RPL9P6-201ENST00000492764 598 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC005726.1-201ENST00000494679 427 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC090453.1-201ENST00000495560 436 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC087369.1-201ENST00000520775 996 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 COX6CP8-201ENST00000522620 226 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC069240.1-201ENST00000548774 375 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC006960.3-201ENST00000561845 705 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 LARP7P2-201ENST00000575306 125 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.13□□□□□ -1.59
RTF1Q92541 AC091304.9-201ENST00000612091 226 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC090517.2-201ENST00000614966 680 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 AC006133.1-201ENST00000617106 264 ntBASIC5.13□□□□□ -1.59
RTF1Q92541 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTF1Q92541 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTF1Q92541 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
RTF1Q92541 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTF1Q92541 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.13□□□□□ -1.59
RTF1Q92541 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTF1Q92541 MTND5P28-201ENST00000438005 1594 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RTF1Q92541 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
RTF1Q92541 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTF1Q92541 RNU6-289P-201ENST00000364093 107 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.12□□□□□ -1.59
RTF1Q92541 RNU6-1293P-201ENST00000384077 107 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 RPL17P50-201ENST00000396131 546 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 DHFRP6-201ENST00000401776 268 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 ZNF603P-201ENST00000405613 487 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 RN7SKP156-201ENST00000410308 342 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 GLRXP1-201ENST00000423261 334 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AL139415.2-201ENST00000431968 163 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 AC083863.1-201ENST00000438811 231 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.12□□□□□ -1.59
RTF1Q92541 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.12□□□□□ -1.59
RTF1Q92541 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.12□□□□□ -1.59
RTF1Q92541 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.12□□□□□ -1.59
RTF1Q92541 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 AC087879.1-201ENST00000474343 374 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RTF1Q92541 AC112204.1-201ENST00000502591 103 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 FTH1P24-201ENST00000503502 462 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.12□□□□□ -1.59
RTF1Q92541 NDUFB4P2-201ENST00000509515 391 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 SNORA67.7-201ENST00000516664 135 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 RNU6-352P-201ENST00000516908 107 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.12□□□□□ -1.59
RTF1Q92541 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.12□□□□□ -1.59
RTF1Q92541 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 AGGF1P8-201ENST00000562979 1000 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC137800.2-201ENST00000574375 120 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.12□□□□□ -1.59
RTF1Q92541 MIR3158-1-201ENST00000583596 81 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.12□□□□□ -1.59
RTF1Q92541 VN1R79P-201ENST00000593540 513 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AL591424.2-201ENST00000617023 128 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 RNU6-156P-201ENST00000621869 107 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 AC138649.3-201ENST00000622154 254 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 AC004520.1-201ENST00000608362 1413 ntBASIC5.12□□□□□ -1.59
RTF1Q92541 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RTF1Q92541 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RTF1Q92541 AC074029.4-201ENST00000624796 1859 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.11□□□□□ -1.59
RTF1Q92541 RNU6-809P-201ENST00000384461 107 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 MIR23B-201ENST00000384832 97 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 PTMAP2-201ENST00000397627 327 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 Y_RNA.608-201ENST00000410647 95 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.11□□□□□ -1.59
RTF1Q92541 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.11□□□□□ -1.59
RTF1Q92541 NPM1P34-201ENST00000428821 893 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 RSU1P2-202ENST00000437884 485 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 AC073614.1-201ENST00000438690 650 ntBASIC5.11□□□□□ -1.59
RTF1Q92541 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms