Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 OR5AK3P-201ENST00000527486 1297 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 CR381670.1-201ENST00000624291 1693 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC009965.2-201ENST00000425328 970 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 TRBV8-2-201ENST00000475637 270 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 RPS3AP50-201ENST00000487064 803 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ZNF702P-202ENST00000434269 1966 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 RNU1-143P-201ENST00000516296 146 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 U1.23-201ENST00000610293 146 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 RNU1-68P-201ENST00000615382 146 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 U1.39-201ENST00000621562 146 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC018634.1-201ENST00000437554 401 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AL645939.1-201ENST00000453429 797 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AL158062.1-201ENST00000619632 745 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC022106.2-201ENST00000620114 757 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AL590004.2-201ENST00000404787 371 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 DYNLL1P7-201ENST00000429273 258 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 EZH2P1-201ENST00000431167 291 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 CLIC4P1-201ENST00000453177 535 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 AL591473.1-201ENST00000464297 313 ntBASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE2Q8WXH0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.413-201ENST00000384007 102 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.754-201ENST00000476024 102 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 ACTR6P1-201ENST00000514311 1104 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 RNU6-826P-201ENST00000516827 104 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 SETP7-201ENST00000552169 453 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.790-201ENST00000614282 102 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.782-201ENST00000614695 102 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC019080.5-201ENST00000624891 757 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 CALM1P2-201ENST00000452941 448 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 HIGD1AP10-201ENST00000527837 282 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC061975.8-201ENST00000587058 721 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AL139156.1-201ENST00000412785 841 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 snoU13.19-201ENST00000459148 104 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC008638.3-201ENST00000603341 463 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC103710.1-201ENST00000610003 901 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AL669942.2-201ENST00000620352 697 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC005332.5-201ENST00000591222 2919 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AC092125.1-201ENST00000562568 1995 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 RNA5SP127-201ENST00000411051 133 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 AL691517.1-201ENST00000440833 1235 ntBASIC0.95□□□□□ -2.26
SYNE2Q8WXH0 HPRT1P3-201ENST00000539521 576 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms