Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC025627.2-201ENST00000576220 160 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC090616.5-202ENST00000582111 297 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 UBE2L4-201ENST00000587688 464 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC233280.2-201ENST00000603917 1070 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC104073.3-201ENST00000610942 955 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AL121772.2-201ENST00000614331 297 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AC002550.2-201ENST00000621246 394 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AL356585.4-201ENST00000623078 1229 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 AL158801.5-201ENST00000623123 465 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 MTND4P26-201ENST00000415971 1359 ntBASIC4.1□□□□□ -1.75
HMGB4Q8WW32 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HMGB4Q8WW32 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC092125.1-201ENST00000562568 1995 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 Y_RNA.46-201ENST00000362695 102 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 RNA5SP22-201ENST00000365393 109 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 RNU6-297P-201ENST00000384636 107 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 U3.20-201ENST00000390909 217 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SNORA40.3-201ENST00000390964 122 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 RPL7P25-201ENST00000404151 721 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SNORA11.1-201ENST00000408133 129 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC244098.2-201ENST00000422068 99 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AL022238.1-201ENST00000442557 355 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC112653.1-201ENST00000443851 386 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 NDUFS5P3-201ENST00000450668 321 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 RPL7L1P8-201ENST00000469911 741 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 ACTR3P3-201ENST00000480448 893 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC090151.1-201ENST00000520784 730 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 MIR3944-201ENST00000581277 108 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 BNIP3P8-201ENST00000597863 560 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC012669.1-201ENST00000603209 283 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC015871.2-201ENST00000603605 948 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 SEPT7P9-203ENST00000604116 343 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC090425.2-201ENST00000608818 501 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC055839.1-201ENST00000634467 498 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 AC099654.13-201ENST00000639774 207 ntBASIC4.09□□□□□ -1.75
HMGB4Q8WW32 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HMGB4Q8WW32 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.09□□□□□ -1.76
HMGB4Q8WW32 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
HMGB4Q8WW32 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 FRG1BP-201ENST00000278882 761 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 MIR208A-201ENST00000362287 71 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 SNORD46.1-201ENST00000364139 104 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU6-213P-201ENST00000384051 104 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU6-348P-201ENST00000384386 107 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 MIR449B-201ENST00000384995 97 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU6-712P-201ENST00000410558 100 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU2-16P-201ENST00000410712 136 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 RNU6-248P-201ENST00000410720 107 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AC078974.1-201ENST00000411597 223 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 USP9YP13-201ENST00000417797 480 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 BX890604.2-201ENST00000427883 474 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 YME1L1P1-201ENST00000429435 297 ntBASIC4.08□□□□□ -1.76
HMGB4Q8WW32 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.08□□□□□ -1.76
HMGB4Q8WW32 PGBD4P3-201ENST00000440731 581 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms