Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SNIP1Q8TAD8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNIP1Q8TAD8 AC025809.2-201ENST00000625085 1802 ntBASIC5.83□□□□□ -1.48
SNIP1Q8TAD8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNIP1Q8TAD8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 U3.7-201ENST00000363668 216 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.272-201ENST00000364696 102 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 RNU6-1325P-201ENST00000364905 105 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AL713922.1-201ENST00000416477 747 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC234779.1-201ENST00000425910 285 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 PIGFP3-201ENST00000441918 722 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC004453.1-201ENST00000487895 408 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.679-201ENST00000516416 91 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 SNORA70.20-201ENST00000516848 126 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 IGKV1D-22-201ENST00000518953 324 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 TRAV32-201ENST00000553993 340 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 MIR5696-201ENST00000578474 85 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC098826.3-201ENST00000603823 466 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC110801.1-201ENST00000623590 212 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AC024651.2-201ENST00000562480 2098 ntBASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNIP1Q8TAD8 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 OR4G2P-202ENST00000641004 1759 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC073365.1-203ENST00000641055 1992 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RNU4-90P-201ENST00000362773 141 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPL21P75-201ENST00000396599 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPL21P28-201ENST00000401418 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL109941.1-201ENST00000401925 229 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 Y_RNA.590-201ENST00000410140 107 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPS15AP6-201ENST00000420703 385 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL590556.1-201ENST00000423231 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL160275.3-201ENST00000423876 471 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 OR6D1P-201ENST00000436165 939 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 PTMAP6-201ENST00000439110 327 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 GEMIN2P1-201ENST00000454246 752 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPL21P11-201ENST00000461458 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPL21P39-201ENST00000463605 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC132942.1-201ENST00000486753 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC093591.1-201ENST00000491435 481 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 RPL21P16-201ENST00000495531 483 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC108043.1-201ENST00000512696 574 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 MIR4776-2-201ENST00000580204 80 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL359881.1-201ENST00000602916 267 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AC174048.1-201ENST00000603389 144 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL161637.1-201ENST00000622380 412 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 AL132640.3-201ENST00000630473 177 ntBASIC5.81□□□□□ -1.48
SNIP1Q8TAD8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms