Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSMEM1Q8N8F7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RNU5E-8P-201ENST00000363502 116 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-723P-201ENST00000383973 107 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-432P-201ENST00000384196 109 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 MIR514A1-201ENST00000385133 98 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-754P-201ENST00000391166 107 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 HSPE1P1-201ENST00000421494 318 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 MTND1P32-201ENST00000433043 938 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RPS3AP50-201ENST00000487064 803 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 HMGB1P36-201ENST00000487709 576 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-798P-201ENST00000516912 103 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 CYCSP29-201ENST00000533731 318 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC124947.2-202ENST00000552735 133 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AL031281.1-201ENST00000604049 488 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC024941.1-201ENST00000612250 334 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC013476.2-201ENST00000614456 459 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC019226.1-201ENST00000625666 515 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 MAPK10-362ENST00000641864 4484 ntBASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSMEM1Q8N8F7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC009902.3-201ENST00000606235 2172 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL672167.1-206ENST00000356293 943 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 RNA5SP399-201ENST00000364003 117 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 SAR1AP2-201ENST00000392696 594 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL590084.2-201ENST00000401481 382 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 MIR1305-201ENST00000408300 86 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL008987.1-201ENST00000415528 237 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 MTCO3P16-201ENST00000454456 754 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-420P-201ENST00000458780 107 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC010468.1-201ENST00000461022 817 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC104472.2-201ENST00000469035 601 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL132838.2-201ENST00000492041 314 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC022447.3-201ENST00000506865 495 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC026726.1-201ENST00000512859 601 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 UBE2NP1-201ENST00000545592 458 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 OR7K1P-201ENST00000546439 926 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC025588.2-201ENST00000604851 466 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AC099778.2-201ENST00000610904 211 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 AL139089.1-201ENST00000620372 975 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 SNORA50A-202ENST00000629536 136 ntBASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSMEM1Q8N8F7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 RNU6-777P-201ENST00000364265 104 ntBASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 SNORA36C-201ENST00000384289 132 ntBASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 Y_RNA.548-201ENST00000384656 105 ntBASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 HMGN2P8-201ENST00000391458 268 ntBASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 HMGN1P24-201ENST00000412282 298 ntBASIC3.61□□□□□ -1.83
LSMEM1Q8N8F7 RPS24P7-201ENST00000416921 246 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms