Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RN7SL568P-201ENST00000493069 298 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RN7SL362P-201ENST00000494228 267 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 SERF1AP1-201ENST00000514575 187 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC091078.2-201ENST00000557145 559 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 MIR4643-201ENST00000577473 78 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 MIR4675-201ENST00000577898 77 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 MIR5692A1-201ENST00000580523 69 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 SMIM12P1-201ENST00000603004 274 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL031601.2-202ENST00000622650 282 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AL591135.1-201ENST00000401578 5914 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 RLIMP1-201ENST00000339626 1680 ntBASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC116Q8IYX3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
CCDC116Q8IYX3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
CCDC116Q8IYX3 AC068870.1-201ENST00000563737 2455 ntBASIC5.71□□□□□ -1.49
CCDC116Q8IYX3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 SAGE4P-201ENST00000442271 3381 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 SNORA21-201ENST00000362423 132 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RNU1-134P-201ENST00000362935 165 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RNU105B-201ENST00000364478 208 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RNU6-14P-201ENST00000384630 106 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AL591034.2-201ENST00000402839 359 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RPL31P2-201ENST00000413849 377 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AL596266.1-201ENST00000448132 400 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC002553.3-201ENST00000453002 341 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AP000797.2-201ENST00000475768 606 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RPL23AP40-201ENST00000487630 390 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RPS4XP20-201ENST00000505751 772 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC006499.3-201ENST00000506077 748 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC074198.2-201ENST00000508153 258 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AL359273.1-201ENST00000510918 627 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 RNU6-861P-201ENST00000516745 106 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC087369.1-201ENST00000520775 996 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 GSTP1P1-201ENST00000548078 319 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 TRAV32-201ENST00000553993 340 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 HNRNPCP4-201ENST00000571636 900 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 MIR4300-201ENST00000581016 96 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 uc_338.31-201ENST00000615595 186 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 ZNF299P-201ENST00000406845 1804 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 AP005435.3-201ENST00000531260 3198 ntBASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CCDC116Q8IYX3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 Y_RNA.27-201ENST00000362540 103 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RNU6-1317P-201ENST00000364582 104 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RNY1P5-201ENST00000383890 115 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL109941.1-201ENST00000401925 229 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 SNORA77.2-201ENST00000408571 112 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RN7SKP86-201ENST00000410454 332 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RPL30P3-201ENST00000424262 333 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL159987.2-201ENST00000432754 307 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC087190.1-201ENST00000484462 480 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC107032.1-201ENST00000485945 480 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 MTND3P25-201ENST00000509243 135 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC007016.1-201ENST00000512110 244 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 SCARNA24.2-201ENST00000516968 130 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AF186190.1-201ENST00000517470 480 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC092121.1-201ENST00000569452 202 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AL034351.1-201ENST00000605288 668 ntBASIC5.7□□□□□ -1.5
CCDC116Q8IYX3 AC008962.1-201ENST00000605729 304 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms