Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
C9orf40Q8IXQ3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RNA5SP167-201ENST00000365461 116 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RNU6-837P-201ENST00000391056 108 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 TAF9BP1-201ENST00000396646 746 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RPL31P1-201ENST00000398116 372 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AL357075.1-201ENST00000404107 726 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC006548.1-201ENST00000427470 102 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC006946.1-201ENST00000429106 328 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC091862.1-201ENST00000438016 1100 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RPS15AP17-201ENST00000470598 390 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC079395.1-201ENST00000510981 262 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 MTND1P24-201ENST00000552175 861 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC006270.2-201ENST00000578523 652 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC010928.3-201ENST00000587712 541 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AL606834.2-201ENST00000602954 668 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC007349.4-201ENST00000608114 532 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC012531.5-201ENST00000611375 151 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC096577.2-201ENST00000611455 153 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC006329.2-201ENST00000611491 394 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 CR381572.1-201ENST00000625098 102 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 AC116618.1-201ENST00000634617 774 ntBASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
C9orf40Q8IXQ3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.03□□□□□ -1.93
C9orf40Q8IXQ3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 MTCO2P17-201ENST00000424336 677 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 COX7BP2-201ENST00000437976 242 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC104978.1-201ENST00000449387 391 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 RPL18AP17-201ENST00000455326 198 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 BX510359.1-201ENST00000456973 237 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC078785.3-201ENST00000476607 425 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 NCOR1P1-202ENST00000486162 291 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC092185.1-201ENST00000491371 97 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 MTCYBP17-201ENST00000503579 789 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC110794.1-201ENST00000505816 425 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC026412.2-201ENST00000512270 1075 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 FABP5P12-201ENST00000515543 389 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 HIGD1AP10-201ENST00000527837 282 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 MIR4637-201ENST00000582405 84 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 SNRPGP15-201ENST00000600149 222 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms