Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AP005597.4-201ENST00000526762 229 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC023050.3-201ENST00000541142 333 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC068714.1-201ENST00000559623 800 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 MIR3118-1-201ENST00000581787 76 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC008687.2-201ENST00000597865 520 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 RPL26P30-202ENST00000602923 645 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 Z98200.1-201ENST00000607298 470 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC105429.2-201ENST00000610567 517 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC233309.1-201ENST00000619522 751 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC009248.2-201ENST00000619826 254 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 AC007546.2-201ENST00000623996 360 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 LINC01109-201ENST00000603837 3081 ntBASIC4.33□□□□□ -1.72
VRK3Q8IV63 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VRK3Q8IV63 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
VRK3Q8IV63 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 VPS35P1-201ENST00000563400 1518 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC025031.4-201ENST00000621248 3271 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNA5SP307-201ENST00000362863 116 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 Y_RNA.132-201ENST00000363421 102 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNA5SP447-201ENST00000363749 119 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNU1-44P-201ENST00000384453 163 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNU6-456P-201ENST00000384493 107 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 MIR606-201ENST00000384851 96 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 U3.22-201ENST00000391120 215 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 DHFRP6-201ENST00000401776 268 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC078974.1-201ENST00000411597 223 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC008280.1-201ENST00000418851 412 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AL356387.2-201ENST00000422272 243 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AL732292.1-201ENST00000426692 226 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 FAM103A2P-201ENST00000444122 354 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 snoU13.1-201ENST00000459157 104 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC026410.2-201ENST00000460281 156 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RPL7P15-201ENST00000461190 712 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RPL7P19-201ENST00000469948 618 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RPS3AP50-201ENST00000487064 803 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC108022.1-201ENST00000493466 478 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNA5SP401-201ENST00000515920 127 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 RNU6-202P-201ENST00000515998 96 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC134698.5-201ENST00000519444 336 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 RPL21P7-201ENST00000557463 483 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC008638.3-201ENST00000603341 463 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC021646.1-201ENST00000605469 484 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC009237.17-201ENST00000618111 748 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC134503.1-201ENST00000633048 54 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC010149.2-201ENST00000637608 315 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 AC100810.6-201ENST00000638068 285 ntBASIC4.32□□□□□ -1.72
VRK3Q8IV63 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
VRK3Q8IV63 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VRK3Q8IV63 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC027290.2-201ENST00000623210 18662 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 MIR331-201ENST00000362302 94 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RNU6-169P-201ENST00000365336 107 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RNU6-108P-201ENST00000365558 107 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL583835.1-201ENST00000399570 407 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC097374.1-203ENST00000400783 485 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL078604.1-201ENST00000404609 466 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 RNU6-1148P-201ENST00000410992 104 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 SNORA74C-2-201ENST00000411179 201 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms