Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AL157700.1-201ENST00000561973 1432 ntBASIC4.34□□□□□ -1.71
TTC30AQ86WT1 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.34□□□□□ -1.71
TTC30AQ86WT1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.34□□□□□ -1.71
TTC30AQ86WT1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TTC30AQ86WT1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
TTC30AQ86WT1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TTC30AQ86WT1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 ZNF734P-201ENST00000419494 1534 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 MTND4P4-201ENST00000439033 1366 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 RNU6-339P-201ENST00000384310 107 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 RNU6-769P-201ENST00000384407 104 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 Y_RNA.493-201ENST00000384422 102 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 MIR513A2-201ENST00000385249 127 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AL138880.1-201ENST00000405824 642 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 RNA5SP39-201ENST00000411245 120 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 RPL21P89-201ENST00000444021 467 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AP000542.1-201ENST00000448473 371 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 RN7SL585P-201ENST00000470538 280 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 CBX3P3-201ENST00000508108 532 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC079140.3-201ENST00000511111 550 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 OR5D17P-201ENST00000531492 978 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC015871.2-201ENST00000603605 948 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 PRELID3BP8-201ENST00000604148 295 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AP000254.1-201ENST00000609934 520 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 HULC.1-201ENST00000612720 240 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AL357080.1-201ENST00000617394 239 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 MIR4727-201ENST00000622232 55 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AC092656.1-203ENST00000624134 423 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 AP005264.7-201ENST00000625003 745 ntBASIC4.33□□□□□ -1.72
TTC30AQ86WT1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TTC30AQ86WT1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC006378.2-201ENST00000623178 2476 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AL356473.1-201ENST00000406203 1408 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RNU6-623P-201ENST00000363143 105 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RNU6-744P-201ENST00000365557 107 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 OR5H15-201ENST00000383696 930 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 U1.1-201ENST00000384101 164 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RNU6-1316P-201ENST00000384242 108 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 Y_RNA.559-201ENST00000384686 107 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RNA5SP171-201ENST00000391071 115 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RN7SKP266-201ENST00000410232 287 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 HSPE1P12-201ENST00000412576 301 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AMD1P2-201ENST00000412936 992 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RPL37P21-201ENST00000435890 276 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC092473.1-201ENST00000441098 221 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 RPS4XP4-201ENST00000443195 763 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 PAXBP1P1-201ENST00000449315 447 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 VN1R105P-201ENST00000486595 910 ntBASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.32□□□□□ -1.72
TTC30AQ86WT1 AC025554.1-201ENST00000505641 188 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms