Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC004076.2-201ENST00000620532 3323 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SKP115-201ENST00000363177 317 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SKP292-201ENST00000365522 317 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 SMIM11P1-201ENST00000369586 178 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 MIR130A-201ENST00000385274 89 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SKP159-201ENST00000410657 292 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-1203P-201ENST00000410703 110 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 SDHDP6-201ENST00000414693 480 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 UBE2V1P4-201ENST00000425374 344 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 DNAJC19P7-201ENST00000428811 344 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RPS3AP46-201ENST00000448352 682 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RPS17P13-201ENST00000448974 407 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 FABP5P13-201ENST00000452144 328 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RPS27AP1-201ENST00000475545 471 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SL432P-201ENST00000484057 298 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 DUTP1-201ENST00000493631 470 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 COX7A2P2-201ENST00000505291 250 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RNU7-4P-201ENST00000516961 62 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC021678.3-201ENST00000517893 476 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC012339.2-201ENST00000523996 453 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC093227.2-201ENST00000589357 285 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AL390123.1-201ENST00000603216 237 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC073410.2-201ENST00000603240 332 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SL544P-201ENST00000617232 284 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RN7SL763P-201ENST00000620922 284 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 RNU6-156P-201ENST00000621869 107 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 AC007842.1-201ENST00000597336 2039 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 OR13C1P-202ENST00000641378 2919 ntBASIC5.75□□□□□ -1.49
LYSMD3Q7Z3D4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AL122126.1-201ENST00000546905 1318 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 DDX18P3-201ENST00000404856 2007 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC138393.1-203ENST00000327086 343 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 SNORA64.1-201ENST00000362600 132 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AL451074.5-201ENST00000415894 435 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 UBE2D3P2-201ENST00000424409 445 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC098869.1-201ENST00000481627 292 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AC241377.1-201ENST00000619797 406 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 AL589994.2-201ENST00000621124 579 ntBASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LYSMD3Q7Z3D4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LYSMD3Q7Z3D4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LYSMD3Q7Z3D4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LYSMD3Q7Z3D4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LYSMD3Q7Z3D4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms