Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 SNORA11-201ENST00000408789 128 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RNU2-9P-201ENST00000410194 145 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RPL23AP30-201ENST00000432419 501 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 BX276092.4-201ENST00000452056 248 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RPL38P4-201ENST00000502376 214 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC105417.1-201ENST00000514691 285 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RNA5SP401-201ENST00000515920 127 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 SNORD27.1-201ENST00000516319 72 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RNU6-1220P-201ENST00000517126 108 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 OR5AL2P-201ENST00000532185 920 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AL110118.1-201ENST00000553543 400 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RPL21P12-201ENST00000559810 515 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 MIR5699-201ENST00000578903 90 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC044792.1-201ENST00000593294 196 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AL020997.2-201ENST00000602607 184 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AL121932.1-201ENST00000605542 214 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 AC139713.2-215ENST00000641428 5037 ntBASIC5.31□□□□□ -1.56
RUFY4Q6ZNE9 MAPK10-349ENST00000641767 3661 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AL442639.1-201ENST00000625030 1899 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 OR1S2-201ENST00000302592 978 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 U3.11-201ENST00000364476 212 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNY3P13-201ENST00000365542 102 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNU4-48P-201ENST00000365559 182 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNU6-116P-201ENST00000384042 109 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 MIR1-2-201ENST00000384961 85 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNU1-82P-201ENST00000390851 165 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNU6-278P-201ENST00000390945 109 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 U3.22-201ENST00000391120 215 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RNA5SP296-201ENST00000410523 111 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RPL23AP1-201ENST00000428990 471 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 ATP5JP1-201ENST00000431631 322 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RPL36AP53-201ENST00000432891 316 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RPS20P5-201ENST00000434808 360 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RPS15AP9-201ENST00000439856 381 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AL445433.1-201ENST00000457507 257 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 snoU109.4-201ENST00000458953 143 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AL049714.1-201ENST00000466686 347 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC087385.1-201ENST00000475062 312 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 HSPD1P15-201ENST00000505573 1122 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC009643.1-201ENST00000532030 391 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 GLUD1P4-201ENST00000590914 418 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 VN1R80P-201ENST00000597126 338 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 SNORD91B-202ENST00000608459 222 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AL590099.1-201ENST00000615276 138 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC244100.1-202ENST00000621554 382 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AL161637.1-201ENST00000622380 412 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 AC006020.1-201ENST00000420179 1854 ntBASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RUFY4Q6ZNE9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RNU4-73P-201ENST00000363164 141 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 Y_RNA.356-201ENST00000365475 113 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 Y_RNA.381-201ENST00000365666 102 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL136116.1-201ENST00000403591 381 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RNU6-1068P-201ENST00000410958 103 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms