Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC091057.2-201ENST00000602594 792 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC093424.1-201ENST00000604999 338 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 AC007349.4-201ENST00000608114 532 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 SNORD39.4-201ENST00000620099 78 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 FAM157B-203ENST00000639350 358 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.36□□□□□ -1.87
RFWD3Q6PCD5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RNU6-441P-201ENST00000384545 106 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AL590084.1-201ENST00000407885 387 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL23AP47-201ENST00000408017 460 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AL136133.1-201ENST00000413694 376 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC092634.6-201ENST00000418558 192 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 PSMA2P3-201ENST00000429685 675 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC005345.1-201ENST00000431868 217 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC006028.1-201ENST00000438379 402 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL23AP76-201ENST00000441860 458 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL23AP33-201ENST00000442301 452 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 USP9YP25-201ENST00000457708 443 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL5P24-201ENST00000463742 885 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL31P13-201ENST00000484151 370 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RPL23AP55-201ENST00000498163 452 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC008837.2-201ENST00000513076 418 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 RN7SKP244-201ENST00000516513 307 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AP001189.2-201ENST00000527320 189 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 HSPE1P14-201ENST00000605812 302 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC107075.1-201ENST00000613695 314 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AL157817.1-201ENST00000614264 790 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC140725.3-201ENST00000616193 880 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC011330.2-201ENST00000621680 635 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AP002782.1-201ENST00000623107 614 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC026422.1-201ENST00000623961 452 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 AC098679.5-201ENST00000624394 571 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 MIR4496-201ENST00000635896 61 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 SAGE4P-201ENST00000442271 3381 ntBASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
RFWD3Q6PCD5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNA5SP374-201ENST00000362939 125 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNU6-1243P-201ENST00000364028 107 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNU6-921P-201ENST00000384361 107 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RPL31P2-201ENST00000413849 377 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AL161449.1-201ENST00000414531 1199 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 LUZP4P1-201ENST00000415420 344 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RPS24P7-201ENST00000416921 246 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RPS15AP40-201ENST00000419621 391 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC012065.2-201ENST00000421295 375 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 HMGB1P12-201ENST00000438594 598 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC009969.1-201ENST00000438726 172 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 HMGB3P11-201ENST00000440127 604 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 MTCO2P25-201ENST00000447065 681 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 SNORA48.10-201ENST00000516965 160 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 Y_RNA.717-201ENST00000517106 92 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 RNA5SP380-201ENST00000517190 98 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AP000790.1-201ENST00000528891 737 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC005832.3-201ENST00000537929 631 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC023050.2-201ENST00000544968 387 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 MIR2682-201ENST00000580305 110 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC012493.2-201ENST00000595083 291 ntBASIC3.34□□□□□ -1.87
RFWD3Q6PCD5 AC107952.2-201ENST00000606048 486 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms