Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC087783.2-201ENST00000605070 562 ntBASIC5.43□□□□□ -1.54
RNF43Q68DV7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
RNF43Q68DV7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF43Q68DV7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL353796.1-201ENST00000561542 3241 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 SNORD113-7-201ENST00000363762 77 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 SNORA51.8-201ENST00000384234 132 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 MIR1182-201ENST00000408363 97 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC096632.1-201ENST00000427395 310 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC020550.1-201ENST00000447385 163 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 MTND1P17-201ENST00000448961 204 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC009963.2-201ENST00000453431 138 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 snoU13.20-201ENST00000459180 104 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL049714.1-201ENST00000466686 347 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC092324.1-201ENST00000468671 324 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC092451.1-201ENST00000480211 153 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 RNU6-256P-201ENST00000516747 97 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 IGKV2-36-201ENST00000519999 223 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL162431.4-201ENST00000604674 411 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 Z82243.1-201ENST00000609432 473 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC092608.2-201ENST00000624427 218 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL732372.2-225ENST00000642124 456 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 AC092747.4-201ENST00000620519 1861 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 SMG1P7-201ENST00000565246 2704 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RNF43Q68DV7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF43Q68DV7 AL672167.1-204ENST00000641875 3017 ntBASIC5.42□□□□□ -1.54
RNF43Q68DV7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AL360270.2-201ENST00000562952 5985 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 STX3-208ENST00000641815 3236 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF43Q68DV7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AL139276.1-201ENST00000311910 1001 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 SNORA62.1-201ENST00000364287 154 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 UBBP2-201ENST00000376781 231 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 Y_RNA.389-201ENST00000383924 113 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 MTCO2P33-201ENST00000402100 465 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 OR6C66P-201ENST00000414917 930 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC048351.1-201ENST00000420064 602 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 C4BPAP2-201ENST00000428434 478 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AL035551.1-201ENST00000446931 348 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 RPL12P20-201ENST00000475538 479 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC098583.1-201ENST00000480875 255 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF43Q68DV7 Y_RNA.680-201ENST00000516441 93 ntBASIC5.41□□□□□ -1.54
RNF43Q68DV7 AC109635.4-202ENST00000531666 412 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms