Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNU6-1003P-201ENST00000517099 105 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 RNU6-1231P-201ENST00000517185 103 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 MTND4LP18-201ENST00000526864 291 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 BNIP3P5-201ENST00000562290 498 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 MIR4277-201ENST00000578298 84 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 MIR3690-201ENST00000580266 75 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC060771.1-201ENST00000582031 164 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 MIR5096-201ENST00000583713 70 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 UBE2L4-201ENST00000587688 464 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC104662.1-201ENST00000604448 511 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL022099.1-201ENST00000604551 712 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL049634.3-201ENST00000604968 457 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL356218.2-201ENST00000605264 187 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC128687.2-201ENST00000609657 566 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AC073114.1-201ENST00000612027 490 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 FAM27D1-201ENST00000612308 341 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL391261.4-201ENST00000616012 481 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 MIR6130-201ENST00000619419 109 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL590240.3-201ENST00000621416 943 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 Z69908.1-201ENST00000622603 247 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL158801.5-201ENST00000623123 465 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC38Q502W7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 MTND4P4-201ENST00000439033 1366 ntBASIC4.22□□□□□ -1.73
CCDC38Q502W7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC38Q502W7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC38Q502W7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC38Q502W7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC38Q502W7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC38Q502W7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC38Q502W7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC38Q502W7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
CCDC38Q502W7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC38Q502W7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
CCDC38Q502W7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 RNA5SP509-201ENST00000364577 119 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 MTND1P21-201ENST00000412991 285 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 RPL18P10-201ENST00000425606 538 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 SKP1P1-201ENST00000438081 489 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 COX6CP2-201ENST00000444980 225 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL359073.1-201ENST00000448036 403 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 RPL31P3-201ENST00000458430 332 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC109327.1-201ENST00000471666 403 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC041039.1-201ENST00000485656 536 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC117522.2-201ENST00000510049 657 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC022483.1-201ENST00000514020 567 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 FAM60BP-201ENST00000578364 658 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC007687.1-201ENST00000602704 304 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL391497.1-201ENST00000608671 547 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC009268.2-201ENST00000621925 457 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AL021368.2-201ENST00000606125 5352 ntBASIC4.21□□□□□ -1.74
CCDC38Q502W7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC38Q502W7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC38Q502W7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC38Q502W7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC38Q502W7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC38Q502W7 RNU2-71P-201ENST00000411395 189 ntBASIC4.2□□□□□ -1.74
CCDC38Q502W7 SSXP9-201ENST00000417503 292 ntBASIC4.2□□□□□ -1.74
CCDC38Q502W7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC38Q502W7 AC087650.1-201ENST00000431445 468 ntBASIC4.2□□□□□ -1.74
CCDC38Q502W7 AC091390.1-201ENST00000433904 331 ntBASIC4.2□□□□□ -1.74
CCDC38Q502W7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC38Q502W7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC38Q502W7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC38Q502W7 AC004866.2-201ENST00000438285 481 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms