Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 Z99129.2-201ENST00000619967 314 ntBASIC3.04□□□□□ -1.92
SMARCB1Q12824 AC093875.1-201ENST00000623688 504 ntBASIC3.04□□□□□ -1.92
SMARCB1Q12824 LRRC77P-213ENST00000637727 880 ntBASIC3.04□□□□□ -1.92
SMARCB1Q12824 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SMARCB1Q12824 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMARCB1Q12824 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.04□□□□□ -1.92
SMARCB1Q12824 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMARCB1Q12824 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMARCB1Q12824 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AL035405.1-201ENST00000400795 710 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 Z77249.1-201ENST00000444622 1175 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 NAP1L1P3-201ENST00000462291 880 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC104629.1-201ENST00000494226 508 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC093278.1-201ENST00000494700 600 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 RNU6-711P-201ENST00000517255 106 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC006518.2-201ENST00000542513 940 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 MTATP6P2-201ENST00000603319 678 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.03□□□□□ -1.92
SMARCB1Q12824 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SMARCB1Q12824 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.03□□□□□ -1.92
SMARCB1Q12824 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMARCB1Q12824 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMARCB1Q12824 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMARCB1Q12824 RNU6-619P-201ENST00000365146 108 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 SNORA51.12-201ENST00000384448 134 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 MIR525-201ENST00000384978 85 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 MIR9-1-201ENST00000385198 89 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 AL138880.1-201ENST00000405824 642 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 MIR1289-1-201ENST00000408836 144 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 RNU6-575P-201ENST00000411326 105 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC027644.1-201ENST00000419595 298 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 RNA5SP356-201ENST00000515972 94 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 SERPINE4P-201ENST00000554978 281 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 ZNF971P-201ENST00000562068 1249 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC006249.1-201ENST00000621223 471 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 AC010338.1-201ENST00000621823 717 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 AP000943.4-201ENST00000622912 357 ntBASIC3.02□□□□□ -1.93
SMARCB1Q12824 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCB1Q12824 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SMARCB1Q12824 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.01□□□□□ -1.93
SMARCB1Q12824 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 AL136520.1-201ENST00000600311 1322 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCB1Q12824 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SMARCB1Q12824 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCB1Q12824 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SMARCB1Q12824 RNU5B-4P-201ENST00000363508 111 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 RNU6-1243P-201ENST00000364028 107 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.01□□□□□ -1.93
SMARCB1Q12824 OR1L1-202ENST00000373686 1083 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 SFR1P1-201ENST00000403720 688 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 AL355615.1-201ENST00000406187 641 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCB1Q12824 OR51A3P-201ENST00000413596 924 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 AC013262.1-201ENST00000426710 252 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 AC109583.1-201ENST00000432156 268 ntBASIC3.01□□□□□ -1.93
SMARCB1Q12824 AC236972.1-201ENST00000433225 199 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms