Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MTND1P35-201ENST00000526739 508 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 AL136363.1-201ENST00000605349 337 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 AC012409.3-201ENST00000611343 981 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 AC245517.5-201ENST00000611529 162 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.13□□□□□ -1.59
SSRP1Q08945 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.13□□□□□ -1.59
SSRP1Q08945 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 LINC01355-201ENST00000566551 5444 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SSRP1Q08945 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 NEAT1-202ENST00000501122 22743 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU6-1322P-201ENST00000364309 107 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU6-534P-201ENST00000364877 106 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNY3P13-201ENST00000365542 102 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 MIR129-1-201ENST00000384972 72 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU2-47P-201ENST00000410649 186 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU2-62P-201ENST00000410868 191 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.12□□□□□ -1.59
SSRP1Q08945 TMSB10P2-201ENST00000416049 131 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.12□□□□□ -1.59
SSRP1Q08945 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 BTF3P10-201ENST00000433415 495 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.12□□□□□ -1.59
SSRP1Q08945 GPR143P-201ENST00000434155 205 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RPL21P89-201ENST00000444021 467 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AC069439.1-201ENST00000494739 167 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC020893.1-201ENST00000502452 580 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC021146.3-201ENST00000511911 260 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU6-798P-201ENST00000516912 103 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 RNU6-1220P-201ENST00000517126 108 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AC090572.1-201ENST00000519251 160 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AL121579.1-201ENST00000555129 305 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.12□□□□□ -1.59
SSRP1Q08945 RPL23AP97-201ENST00000568955 471 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AC112230.1-201ENST00000604342 547 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC010680.4-201ENST00000605334 543 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AC099669.2-201ENST00000616549 437 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 AL138721.1-201ENST00000616756 179 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 AC105074.1-201ENST00000623380 3095 ntBASIC5.12□□□□□ -1.59
SSRP1Q08945 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.12□□□□□ -1.59
SSRP1Q08945 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSRP1Q08945 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SSRP1Q08945 OR1S2-201ENST00000302592 978 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 RNU6-1097P-201ENST00000363586 107 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 RNU6-356P-201ENST00000384140 107 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 HDGFP1-201ENST00000405943 252 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AL139413.1-201ENST00000421309 217 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.11□□□□□ -1.59
SSRP1Q08945 DPPA3P1-201ENST00000448050 469 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 NANOGP10-201ENST00000453325 895 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 DHFRP3-201ENST00000455595 559 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 RNU7-59P-201ENST00000459101 61 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 RPS29P22-201ENST00000472363 168 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 RNU6-1281P-201ENST00000516223 105 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.11□□□□□ -1.59
SSRP1Q08945 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 CR383656.7-201ENST00000548164 174 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.11□□□□□ -1.59
SSRP1Q08945 OR4T1P-201ENST00000554933 911 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AL359212.1-201ENST00000556608 614 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.11□□□□□ -1.59
SSRP1Q08945 LLPHP1-201ENST00000603571 367 ntBASIC5.11□□□□□ -1.59
SSRP1Q08945 AC007621.1-201ENST00000604544 437 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms