Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.65□□□□□ -1.67
IRF9Q00978 RPL23AP33-201ENST00000442301 452 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 CEACAMP6-201ENST00000452007 574 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC126389.1-201ENST00000477436 290 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 RN7SL346P-201ENST00000491561 294 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC135721.1-201ENST00000497954 479 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC105417.1-201ENST00000514691 285 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 HMGB1P41-201ENST00000520234 440 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.65□□□□□ -1.67
IRF9Q00978 SUB1P1-201ENST00000524415 382 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC006254.3-201ENST00000603353 884 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AL121757.2-201ENST00000611223 313 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 uc_338.18-201ENST00000615451 175 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 MIR7155-201ENST00000615925 56 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AL603758.1-201ENST00000618654 241 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC100810.6-201ENST00000638068 285 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
IRF9Q00978 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.65□□□□□ -1.67
IRF9Q00978 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
IRF9Q00978 MAPK10-349ENST00000641767 3661 ntBASIC4.65□□□□□ -1.67
IRF9Q00978 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.65□□□□□ -1.67
IRF9Q00978 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
IRF9Q00978 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.64□□□□□ -1.67
IRF9Q00978 AL442639.1-201ENST00000625030 1899 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.64□□□□□ -1.67
IRF9Q00978 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 RNU6-845P-201ENST00000362578 103 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 Y_RNA.356-201ENST00000365475 113 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 RNU6-641P-201ENST00000384006 107 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 MIR153-1-201ENST00000384914 90 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
IRF9Q00978 AL136372.1-201ENST00000403060 228 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 RNU4-78P-201ENST00000410940 126 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 RNA5SP107-201ENST00000411358 122 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 EIF4A1P3-201ENST00000411521 244 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 RPL23AP27-201ENST00000415161 451 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC005094.1-201ENST00000440420 368 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AL589765.3-201ENST00000446084 462 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC073850.1-201ENST00000449243 255 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AL591623.2-201ENST00000449978 222 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC234775.1-201ENST00000454247 670 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AURKAPS2-201ENST00000454983 333 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC007967.1-201ENST00000455422 1159 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 NIPA2P2-201ENST00000496376 1083 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 NDUFA5P12-201ENST00000503796 343 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC111000.3-201ENST00000508057 576 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 HMGN1P28-201ENST00000521340 364 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.64□□□□□ -1.67
IRF9Q00978 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 DEFB108D-201ENST00000527787 222 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.64□□□□□ -1.67
IRF9Q00978 AC093838.1-201ENST00000613014 469 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC130324.3-201ENST00000614165 542 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 AC010133.1-201ENST00000615809 842 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 U73479.1-201ENST00000618062 168 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.64□□□□□ -1.67
IRF9Q00978 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.64□□□□□ -1.67
IRF9Q00978 AL592437.2-201ENST00000421655 2434 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 OR4G1P-203ENST00000641984 1631 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 IRF5P1-201ENST00000504852 2164 ntBASIC4.64□□□□□ -1.67
IRF9Q00978 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
IRF9Q00978 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
IRF9Q00978 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.63□□□□□ -1.67
IRF9Q00978 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
IRF9Q00978 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
IRF9Q00978 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
IRF9Q00978 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
IRF9Q00978 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
IRF9Q00978 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.63□□□□□ -1.67
IRF9Q00978 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
IRF9Q00978 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.63□□□□□ -1.67
IRF9Q00978 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
IRF9Q00978 AP001273.1-201ENST00000624493 3152 ntBASIC4.63□□□□□ -1.67
IRF9Q00978 RN7SKP104-201ENST00000362605 328 ntBASIC4.63□□□□□ -1.67
IRF9Q00978 Y_RNA.509-201ENST00000384506 99 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms