Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC5Q00444 AC015908.1-201ENST00000478739 476 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC5Q00444 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC5Q00444 AC034159.1-201ENST00000513885 583 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 RNA5SP282-201ENST00000516355 108 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC5Q00444 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.36□□□□□ -2.03
HOXC5Q00444 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC5Q00444 AC090695.1-201ENST00000561269 1222 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC5Q00444 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC5Q00444 AC006386.2-201ENST00000624491 75 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AC012005.1-201ENST00000624575 75 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 AL121594.5-201ENST00000631724 573 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.36□□□□□ -2.03
HOXC5Q00444 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC5Q00444 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC5Q00444 AL512283.1-201ENST00000606756 1384 ntBASIC2.36□□□□□ -2.03
HOXC5Q00444 SAGE4P-201ENST00000442271 3381 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AC116096.1-201ENST00000566804 2314 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC5Q00444 AL365361.1-201ENST00000566942 3481 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 OR5J1P-201ENST00000313544 939 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 SNORD62.1-201ENST00000362541 86 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 RNVU1-3-201ENST00000364313 161 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC5Q00444 RNU6-1077P-201ENST00000410506 102 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 RPS3AP9-201ENST00000417027 792 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC244453.4-201ENST00000419150 388 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 TPTE2P1-204ENST00000435256 593 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 MTND1P33-201ENST00000446251 917 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AL445669.2-201ENST00000454425 421 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 SNORD109B-201ENST00000458961 67 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 SNORD109A-201ENST00000459128 67 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 RPL21P131-201ENST00000497298 483 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AC026801.2-201ENST00000515352 425 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 GTF3AP2-201ENST00000557014 266 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AADACP1-206ENST00000561502 1193 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC012254.4-201ENST00000588843 273 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC060766.3-201ENST00000591442 263 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 ATP1B3P1-201ENST00000605365 821 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 AC090116.1-201ENST00000615679 446 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC090617.9-201ENST00000623751 147 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC092608.3-201ENST00000625017 386 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 AC083865.1-201ENST00000636634 831 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC5Q00444 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC5Q00444 AP000526.1-201ENST00000603308 1388 ntBASIC2.35□□□□□ -2.03
HOXC5Q00444 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC5Q00444 ZNF90P1-201ENST00000480493 1951 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC5Q00444 RNU6-1249P-201ENST00000363237 111 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 RNU6-761P-201ENST00000384148 107 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 RNU4-65P-201ENST00000410473 140 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC5Q00444 MTCO3P12-201ENST00000416718 547 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC233728.2-201ENST00000425348 757 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC5Q00444 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC107083.1-201ENST00000439643 279 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 GAPDHP39-201ENST00000481866 979 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 RPS27P23-201ENST00000487608 251 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC5Q00444 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC5Q00444 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC5Q00444 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXC5Q00444 DUXAP4-201ENST00000603046 613 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AC128687.1-201ENST00000605304 619 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AC005000.2-201ENST00000605468 310 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AL355802.4-201ENST00000607635 548 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AC025016.1-201ENST00000616746 682 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 FO624990.1-201ENST00000636373 85 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 AC046144.1-201ENST00000478559 1853 ntBASIC2.34□□□□□ -2.03
HOXC5Q00444 Z82195.2-201ENST00000612348 18351 ntBASIC2.34□□□□□ -2.04
HOXC5Q00444 AL136520.1-201ENST00000600311 1322 ntBASIC2.34□□□□□ -2.04
HOXC5Q00444 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms