Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CL1P78423 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC009220.1-201ENST00000451614 275 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 MTND1P9-201ENST00000453775 944 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC234775.1-201ENST00000454247 670 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CL1P78423 RNA5SP246-201ENST00000458909 119 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 RNA5SP269-201ENST00000459032 137 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC069499.1-201ENST00000489433 509 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CL1P78423 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC021146.1-201ENST00000511202 716 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.3□□□□□ -1.88
CX3CL1P78423 RN7SKP244-201ENST00000516513 307 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 RNU6-798P-201ENST00000516912 103 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC103783.1-201ENST00000520506 373 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AP004242.1-201ENST00000533701 349 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 RFPL1S-203ENST00000539579 330 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.3□□□□□ -1.88
CX3CL1P78423 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AC022655.2-201ENST00000577280 318 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC023575.1-201ENST00000580510 358 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AC112191.3-201ENST00000604371 277 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 AL022099.1-201ENST00000604551 712 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 MIR486-1-201ENST00000612171 68 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
CX3CL1P78423 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CX3CL1P78423 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.3□□□□□ -1.88
CX3CL1P78423 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CX3CL1P78423 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC095050.2-201ENST00000510748 1458 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 Y_RNA.201-201ENST00000364052 96 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 CCNG1P1-201ENST00000406783 885 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 RPS3AP24-201ENST00000407896 734 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 RNU2-43P-201ENST00000410306 190 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 Y_RNA.608-201ENST00000410647 95 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 RPL22P17-201ENST00000438729 315 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC092641.1-201ENST00000440229 772 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 MTCO1P19-201ENST00000443487 500 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 H2AFZP6-201ENST00000444403 394 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 ST13P20-201ENST00000447996 1065 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 TPT1P14-201ENST00000448018 505 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 NUTF2P3-201ENST00000448540 384 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 DNAJC19P1-201ENST00000455312 319 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 SNRPGP5-201ENST00000456003 220 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 UBDP1-202ENST00000457888 382 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 RNU6-956P-201ENST00000458868 103 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 KLHL2P1-201ENST00000508691 521 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC022447.1-201ENST00000515358 464 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AP003730.1-201ENST00000524605 285 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 CBX3P5-201ENST00000552017 521 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.29□□□□□ -1.88
CX3CL1P78423 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CX3CL1P78423 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.29□□□□□ -1.88
CX3CL1P78423 BNIP3P5-201ENST00000562290 498 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 MIR3939-201ENST00000582614 106 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC022146.1-201ENST00000595307 847 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC119751.7-201ENST00000600494 245 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC110741.2-201ENST00000605278 268 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 RN7SKP299-201ENST00000606679 301 ntBASIC3.29□□□□□ -1.88
CX3CL1P78423 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms