Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL845331.3-202ENST00000562856 261 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.99□□□□□ -1.77
RAE1P78406 AC092325.1-201ENST00000566449 554 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 AC099489.2-201ENST00000574976 260 ntBASIC3.99□□□□□ -1.77
RAE1P78406 SNORA59B-202ENST00000578183 701 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 AC068790.4-201ENST00000602474 263 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC012603.1-201ENST00000606424 528 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC092954.2-201ENST00000609103 430 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AL391813.2-201ENST00000609113 322 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AL590099.1-201ENST00000615276 138 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC099669.2-201ENST00000616549 437 ntBASIC3.99□□□□□ -1.77
RAE1P78406 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 MIR7702-201ENST00000621931 59 ntBASIC3.99□□□□□ -1.77
RAE1P78406 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 AC000123.3-201ENST00000624029 4975 ntBASIC3.99□□□□□ -1.77
RAE1P78406 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.99□□□□□ -1.77
RAE1P78406 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
RAE1P78406 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.99□□□□□ -1.77
RAE1P78406 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RAE1P78406 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RAE1P78406 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAE1P78406 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RAE1P78406 RNU4-1-201ENST00000363925 141 ntBASIC3.98□□□□□ -1.77
RAE1P78406 RNU6-356P-201ENST00000384140 107 ntBASIC3.98□□□□□ -1.77
RAE1P78406 MIR585-201ENST00000384887 94 ntBASIC3.98□□□□□ -1.77
RAE1P78406 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RAE1P78406 AC127391.1-201ENST00000411737 98 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
RAE1P78406 AC092832.1-201ENST00000422934 400 ntBASIC3.98□□□□□ -1.77
RAE1P78406 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.98□□□□□ -1.77
RAE1P78406 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.98□□□□□ -1.77
RAE1P78406 AC073464.1-201ENST00000429823 534 ntBASIC3.98□□□□□ -1.77
RAE1P78406 CKS1BP5-201ENST00000434172 273 ntBASIC3.98□□□□□ -1.77
RAE1P78406 MTND4LP10-201ENST00000435146 291 ntBASIC3.98□□□□□ -1.77
RAE1P78406 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.98□□□□□ -1.77
RAE1P78406 MTATP6P30-201ENST00000443540 664 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AL136380.1-201ENST00000447970 162 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 MTND1P12-201ENST00000455231 147 ntBASIC3.98□□□□□ -1.77
RAE1P78406 snoU13.3-201ENST00000459441 104 ntBASIC3.98□□□□□ -1.77
RAE1P78406 RPS7P7-201ENST00000463499 571 ntBASIC3.98□□□□□ -1.77
RAE1P78406 HMGB1P25-201ENST00000468402 607 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC011276.1-201ENST00000469688 323 ntBASIC3.98□□□□□ -1.77
RAE1P78406 RN7SL459P-201ENST00000481078 302 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC041039.1-201ENST00000485656 536 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC010587.1-201ENST00000505809 469 ntBASIC3.98□□□□□ -1.77
RAE1P78406 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.98□□□□□ -1.77
RAE1P78406 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.98□□□□□ -1.77
RAE1P78406 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 AC234778.2-201ENST00000566241 354 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.98□□□□□ -1.77
RAE1P78406 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.98□□□□□ -1.77
RAE1P78406 AC008745.1-201ENST00000604064 271 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AL139286.1-201ENST00000604465 483 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AL133173.2-201ENST00000614270 90 ntBASIC3.98□□□□□ -1.77
RAE1P78406 RN7SL722P-201ENST00000617780 284 ntBASIC3.98□□□□□ -1.77
RAE1P78406 RN7SL565P-201ENST00000618246 284 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 AL356321.1-201ENST00000621360 228 ntBASIC3.98□□□□□ -1.77
RAE1P78406 AC009268.2-201ENST00000621925 457 ntBASIC3.98□□□□□ -1.77
RAE1P78406 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAE1P78406 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.98□□□□□ -1.77
RAE1P78406 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RAE1P78406 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
RAE1P78406 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RAE1P78406 RNU6-114P-201ENST00000384704 105 ntBASIC3.97□□□□□ -1.77
RAE1P78406 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.97□□□□□ -1.77
RAE1P78406 AC069157.1-201ENST00000421749 137 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC019097.1-201ENST00000424783 735 ntBASIC3.97□□□□□ -1.77
RAE1P78406 DPPA2P1-201ENST00000428060 556 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC000111.3-201ENST00000433478 193 ntBASIC3.97□□□□□ -1.77
RAE1P78406 MRPS18BP2-201ENST00000434310 759 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AL596276.1-201ENST00000434465 418 ntBASIC3.97□□□□□ -1.77
RAE1P78406 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAE1P78406 Z99127.3-201ENST00000448158 395 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.97□□□□□ -1.77
RAE1P78406 MTCO2P29-201ENST00000465212 189 ntBASIC3.97□□□□□ -1.77
RAE1P78406 AL121769.1-201ENST00000469473 401 ntBASIC3.97□□□□□ -1.77
RAE1P78406 ST13P14-201ENST00000474095 734 ntBASIC3.97□□□□□ -1.77
RAE1P78406 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.97□□□□□ -1.77
RAE1P78406 AF213884.1-201ENST00000488102 463 ntBASIC3.97□□□□□ -1.77
RAE1P78406 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms