Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.93□□□□□ -2.1
CKS1BP61024 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKS1BP61024 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CKS1BP61024 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC073325.2-201ENST00000339545 159 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 MIR26A1-201ENST00000362205 77 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RNU6-989P-201ENST00000362756 107 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RNA5SP479-201ENST00000364858 117 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RNU6-198P-201ENST00000384258 104 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CKS1BP61024 SSXP10-201ENST00000402595 565 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 Y_RNA.625-201ENST00000411256 107 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AC009414.1-201ENST00000427200 443 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.92□□□□□ -2.1
CKS1BP61024 EZH2P1-201ENST00000431167 291 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKS1BP61024 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC008155.2-201ENST00000464337 397 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AC090515.1-201ENST00000465295 476 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RN7SL542P-201ENST00000467147 294 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 SNORA31.18-201ENST00000517043 134 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AC139103.1-201ENST00000534696 1030 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC005412.1-201ENST00000580812 1049 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 RPL23AP92-201ENST00000603609 255 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 AL354950.1-201ENST00000614150 568 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 AC091953.5-201ENST00000622919 233 ntBASIC1.92□□□□□ -2.1
CKS1BP61024 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CKS1BP61024 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
CKS1BP61024 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC000403.1-201ENST00000613696 3585 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 RNU6-1074P-201ENST00000383995 104 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 SNORA51.11-201ENST00000384442 131 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 RNU6-851P-201ENST00000384565 107 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC079780.1-201ENST00000428259 207 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AL050321.1-201ENST00000432363 400 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 AL513043.1-201ENST00000439124 535 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 MRPL50P4-201ENST00000446432 475 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 OR6K5P-201ENST00000447050 945 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AC112492.1-201ENST00000449607 712 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 HMGB1P5-202ENST00000451497 985 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC117440.1-201ENST00000474107 571 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CKS1BP61024 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 SCGB1D5P-201ENST00000515134 247 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 BTF3P12-201ENST00000519620 469 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.91□□□□□ -2.1
CKS1BP61024 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.91□□□□□ -2.1
CKS1BP61024 AC023824.2-201ENST00000566185 400 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 ZNF861P-201ENST00000588126 639 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 BNIP3P11-201ENST00000603878 563 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 ELOCP35-201ENST00000604289 336 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.91□□□□□ -2.1
CKS1BP61024 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AC015967.1-201ENST00000619893 476 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 AC039056.2-201ENST00000622261 511 ntBASIC1.91□□□□□ -2.1
CKS1BP61024 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CKS1BP61024 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.91□□□□□ -2.1
CKS1BP61024 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.9□□□□□ -2.1
CKS1BP61024 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.9□□□□□ -2.11
CKS1BP61024 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 RNU6-301P-201ENST00000384277 107 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPL36AP36-201ENST00000418616 301 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPL7P44-201ENST00000424827 742 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPL7L1P10-201ENST00000427790 463 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPL36P19-201ENST00000430744 301 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CKS1BP61024 NDUFB4P6-201ENST00000436819 366 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPL23AP74-201ENST00000437246 471 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC1.9□□□□□ -2.11
CKS1BP61024 AL359073.1-201ENST00000448036 403 ntBASIC1.9□□□□□ -2.11
CKS1BP61024 RPS3AP43-201ENST00000479743 781 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms