Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC010350.1-201ENST00000504908 231 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC106782.4-201ENST00000568264 210 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
GFRA1P56159 MIR4443-201ENST00000585052 53 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC008638.3-201ENST00000603341 463 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC092747.3-201ENST00000603769 301 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AL138889.2-201ENST00000603883 242 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.67□□□□□ -1.66
GFRA1P56159 AC012409.4-201ENST00000612923 249 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 AC007998.5-201ENST00000622938 237 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 THAP12P5-201ENST00000405864 2275 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
GFRA1P56159 MAPK10-328ENST00000641553 4009 ntBASIC4.67□□□□□ -1.66
GFRA1P56159 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
GFRA1P56159 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA1P56159 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
GFRA1P56159 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
GFRA1P56159 SNORA74A-201ENST00000364089 198 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 Y_RNA.259-201ENST00000364619 101 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 Y_RNA.301-201ENST00000364990 103 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
GFRA1P56159 RNA5SP241-201ENST00000391326 114 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AL080315.1-201ENST00000406055 466 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 POLHP1-201ENST00000411806 470 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.66□□□□□ -1.66
GFRA1P56159 BTF3L4P3-201ENST00000418879 476 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 MTCO2P27-201ENST00000420740 428 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 OR2AH1P-201ENST00000425717 928 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC090774.1-201ENST00000435925 246 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA1P56159 NDUFA5P4-201ENST00000436704 385 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA1P56159 HMGB3P11-201ENST00000440127 604 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RPL7L1P1-201ENST00000448259 785 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 Y_RNA.635-201ENST00000459041 101 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.66□□□□□ -1.66
GFRA1P56159 AC093270.2-201ENST00000486157 792 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RBBP4P6-201ENST00000508098 202 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 KLHL2P1-201ENST00000508691 521 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA1P56159 RNU6-559P-201ENST00000516151 98 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RN7SKP66-201ENST00000516681 231 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 RNU6-685P-201ENST00000517088 95 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA1P56159 AP000889.2-201ENST00000532684 490 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.66□□□□□ -1.66
GFRA1P56159 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA1P56159 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.66□□□□□ -1.66
GFRA1P56159 MTCO3P13-201ENST00000577757 781 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC008521.1-201ENST00000587471 187 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AC022432.1-201ENST00000595739 310 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AP001330.4-201ENST00000604350 154 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AL670379.4-201ENST00000605279 254 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.66□□□□□ -1.66
GFRA1P56159 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA1P56159 AL627230.1-201ENST00000613077 211 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA1P56159 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
GFRA1P56159 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 AL031595.2-201ENST00000624215 19071 ntBASIC4.66□□□□□ -1.66
GFRA1P56159 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA1P56159 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA1P56159 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
GFRA1P56159 MTND5P3-201ENST00000438536 1800 ntBASIC4.65□□□□□ -1.66
GFRA1P56159 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.65□□□□□ -1.66
GFRA1P56159 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA1P56159 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA1P56159 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
GFRA1P56159 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA1P56159 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.65□□□□□ -1.66
GFRA1P56159 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA1P56159 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
GFRA1P56159 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
GFRA1P56159 Y_RNA.326-201ENST00000365176 113 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 RNU6-1297P-201ENST00000384415 104 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 SNORD3H-201ENST00000384486 214 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 SNORA11B-201ENST00000408175 129 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 GPS2P1-201ENST00000411761 986 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 AL591848.1-201ENST00000413092 322 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 AC093162.1-201ENST00000419682 124 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 PPP1R11P2-201ENST00000423543 382 ntBASIC4.65□□□□□ -1.67
GFRA1P56159 AL353729.1-201ENST00000425044 720 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms