Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH12P55289 MTATP6P3-201ENST00000581686 676 ntBASIC3.77□□□□□ -1.81
CDH12P55289 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH12P55289 UBE2L4-201ENST00000587688 464 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AL359999.1-201ENST00000604513 294 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC004853.1-201ENST00000604902 698 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AC006329.2-201ENST00000611491 394 ntBASIC3.77□□□□□ -1.81
CDH12P55289 MIR486-1-201ENST00000612171 68 ntBASIC3.77□□□□□ -1.81
CDH12P55289 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.77□□□□□ -1.81
CDH12P55289 AL158801.5-201ENST00000623123 465 ntBASIC3.77□□□□□ -1.81
CDH12P55289 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC009951.1-201ENST00000623674 2614 ntBASIC3.77□□□□□ -1.81
CDH12P55289 MTND5P33-201ENST00000571250 1450 ntBASIC3.77□□□□□ -1.81
CDH12P55289 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH12P55289 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH12P55289 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
CDH12P55289 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH12P55289 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH12P55289 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 RNY4P34-201ENST00000364779 95 ntBASIC3.76□□□□□ -1.81
CDH12P55289 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 RNU6-1279P-201ENST00000383917 103 ntBASIC3.76□□□□□ -1.81
CDH12P55289 RNU6-761P-201ENST00000384148 107 ntBASIC3.76□□□□□ -1.81
CDH12P55289 RNU1-89P-201ENST00000384592 164 ntBASIC3.76□□□□□ -1.81
CDH12P55289 MIR153-1-201ENST00000384914 90 ntBASIC3.76□□□□□ -1.81
CDH12P55289 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CDH12P55289 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 RPS4XP9-201ENST00000405151 780 ntBASIC3.76□□□□□ -1.81
CDH12P55289 FCF1P10-201ENST00000407590 479 ntBASIC3.76□□□□□ -1.81
CDH12P55289 RNU6-195P-201ENST00000411352 109 ntBASIC3.76□□□□□ -1.81
CDH12P55289 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 SPA17P1-201ENST00000416656 452 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 RPS6P12-201ENST00000432491 726 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC073614.1-201ENST00000438690 650 ntBASIC3.76□□□□□ -1.81
CDH12P55289 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AC098824.1-201ENST00000453565 980 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 RNA5SP246-201ENST00000458909 119 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC041039.1-201ENST00000485656 536 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH12P55289 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 COX7A2P2-201ENST00000505291 250 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH12P55289 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 MTCO2P4-201ENST00000517968 247 ntBASIC3.76□□□□□ -1.81
CDH12P55289 MTND4LP26-201ENST00000518144 282 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC022616.6-201ENST00000520479 119 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH12P55289 OR5G4P-201ENST00000525251 760 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
CDH12P55289 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH12P55289 OR8L1P-201ENST00000534005 955 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AC123904.2-201ENST00000548059 300 ntBASIC3.76□□□□□ -1.81
CDH12P55289 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH12P55289 MIR4458-201ENST00000578872 75 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH12P55289 AC020914.4-201ENST00000597690 277 ntBASIC3.76□□□□□ -1.81
CDH12P55289 CKS1BP3-201ENST00000600888 237 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AL356218.2-201ENST00000605264 187 ntBASIC3.76□□□□□ -1.81
CDH12P55289 HMGB1P50-201ENST00000605814 607 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC126118.1-201ENST00000607744 628 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AL391813.2-201ENST00000609113 322 ntBASIC3.76□□□□□ -1.81
CDH12P55289 OR10AB1P-201ENST00000609613 938 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC103710.1-201ENST00000610003 901 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC105429.2-201ENST00000610567 517 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AL591424.2-201ENST00000617023 128 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC009159.1-201ENST00000618386 642 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH12P55289 AP006248.2-201ENST00000623309 592 ntBASIC3.76□□□□□ -1.81
CDH12P55289 AC110994.2-201ENST00000635481 492 ntBASIC3.76□□□□□ -1.81
CDH12P55289 OR5AK4P-201ENST00000635912 903 ntBASIC3.76□□□□□ -1.81
CDH12P55289 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH12P55289 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH12P55289 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH12P55289 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH12P55289 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH12P55289 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms