Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
VCPP55072 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.52□□□□□ -1.85
VCPP55072 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VCPP55072 OR5H2-201ENST00000355273 945 ntBASIC3.51□□□□□ -1.85
VCPP55072 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VCPP55072 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCPP55072 Y_RNA.578-201ENST00000390903 88 ntBASIC3.51□□□□□ -1.85
VCPP55072 MTCO1P56-201ENST00000401674 224 ntBASIC3.51□□□□□ -1.85
VCPP55072 TMSB4XP8-201ENST00000402089 135 ntBASIC3.51□□□□□ -1.85
VCPP55072 TMSB4XP6-201ENST00000415187 135 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC063979.1-201ENST00000415539 377 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.51□□□□□ -1.85
VCPP55072 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.51□□□□□ -1.85
VCPP55072 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.51□□□□□ -1.85
VCPP55072 TMSB4XP1-201ENST00000424567 135 ntBASIC3.51□□□□□ -1.85
VCPP55072 C1DP1-201ENST00000426049 402 ntBASIC3.51□□□□□ -1.85
VCPP55072 HMGN3P1-201ENST00000453847 193 ntBASIC3.51□□□□□ -1.85
VCPP55072 snoU109.3-201ENST00000459477 145 ntBASIC3.51□□□□□ -1.85
VCPP55072 RPL7P38-201ENST00000488396 739 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC021146.5-201ENST00000503544 545 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC096571.1-202ENST00000506634 735 ntBASIC3.51□□□□□ -1.85
VCPP55072 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
VCPP55072 RNA5SP135-201ENST00000517019 125 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.51□□□□□ -1.85
VCPP55072 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCPP55072 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCPP55072 DEFB130C-202ENST00000530001 230 ntBASIC3.51□□□□□ -1.85
VCPP55072 LRRC6P1-201ENST00000532188 885 ntBASIC3.51□□□□□ -1.85
VCPP55072 OR8K4P-201ENST00000534608 872 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.51□□□□□ -1.85
VCPP55072 AC005476.1-201ENST00000554427 397 ntBASIC3.51□□□□□ -1.85
VCPP55072 AL390838.2-201ENST00000602394 274 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.51□□□□□ -1.85
VCPP55072 AC016877.3-201ENST00000606778 504 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC024060.1-201ENST00000607052 494 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC104985.3-201ENST00000623479 597 ntBASIC3.51□□□□□ -1.85
VCPP55072 AC010608.3-201ENST00000625048 527 ntBASIC3.51□□□□□ -1.85
VCPP55072 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCPP55072 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
VCPP55072 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCPP55072 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCPP55072 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VCPP55072 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
VCPP55072 RNA5SP107-201ENST00000411358 122 ntBASIC3.5□□□□□ -1.85
VCPP55072 RPL35AP12-201ENST00000425362 338 ntBASIC3.5□□□□□ -1.85
VCPP55072 TRIAP1P1-201ENST00000427062 225 ntBASIC3.5□□□□□ -1.85
VCPP55072 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.5□□□□□ -1.85
VCPP55072 AC140076.1-201ENST00000449897 361 ntBASIC3.5□□□□□ -1.85
VCPP55072 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCPP55072 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 AC021678.1-201ENST00000505195 936 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC110794.1-201ENST00000505816 425 ntBASIC3.5□□□□□ -1.85
VCPP55072 MTCO3P44-201ENST00000510977 541 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC091163.3-201ENST00000518269 1144 ntBASIC3.5□□□□□ -1.85
VCPP55072 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 AC021451.1-201ENST00000523498 1129 ntBASIC3.5□□□□□ -1.85
VCPP55072 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.5□□□□□ -1.85
VCPP55072 AC006518.1-201ENST00000541449 943 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 OR4T1P-201ENST00000554933 911 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 AC006539.2-201ENST00000601729 572 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC103881.1-201ENST00000603476 538 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC025588.3-201ENST00000604182 274 ntBASIC3.5□□□□□ -1.85
VCPP55072 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.5□□□□□ -1.85
VCPP55072 AL592148.2-201ENST00000612210 372 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC006213.4-201ENST00000616184 634 ntBASIC3.5□□□□□ -1.85
VCPP55072 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.5□□□□□ -1.85
VCPP55072 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.5□□□□□ -1.85
VCPP55072 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.5□□□□□ -1.85
VCPP55072 AC087821.2-201ENST00000637086 450 ntBASIC3.5□□□□□ -1.85
VCPP55072 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.5□□□□□ -1.85
VCPP55072 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCPP55072 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCPP55072 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCPP55072 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.5□□□□□ -1.85
VCPP55072 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
VCPP55072 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VCPP55072 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.49□□□□□ -1.85
VCPP55072 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCPP55072 RPL7P26-201ENST00000333817 754 ntBASIC3.49□□□□□ -1.85
VCPP55072 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
VCPP55072 RNU6-224P-201ENST00000384055 107 ntBASIC3.49□□□□□ -1.85
VCPP55072 RNU6-441P-201ENST00000384545 106 ntBASIC3.49□□□□□ -1.85
VCPP55072 AL139098.1-201ENST00000407291 389 ntBASIC3.49□□□□□ -1.85
VCPP55072 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 GTF2IP3-201ENST00000433887 494 ntBASIC3.49□□□□□ -1.85
VCPP55072 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.49□□□□□ -1.85
VCPP55072 AP002884.2-201ENST00000471647 395 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms