Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC010680.4-201ENST00000605334 543 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 NDUFA8P1-201ENST00000605525 367 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL391813.2-201ENST00000609113 322 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC128687.2-201ENST00000609657 566 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC090510.2-201ENST00000617465 629 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 MIR7702-201ENST00000621931 59 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 MIR6730-201ENST00000622213 67 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL359740.1-201ENST00000624340 592 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL049536.1-201ENST00000625043 744 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC091925.2-201ENST00000625059 256 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA1P49639 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA1P49639 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA1P49639 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 AC092125.1-201ENST00000562568 1995 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC005183.1-201ENST00000603687 1979 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA1P49639 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA1P49639 Y_RNA.46-201ENST00000362695 102 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 MIR153-1-201ENST00000384914 90 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 MT-TC-201ENST00000387405 66 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 MIR3065-201ENST00000390137 79 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 OR6C69P-201ENST00000394268 893 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RPS3AP23-201ENST00000401762 784 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 Y_RNA.608-201ENST00000410647 95 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RNU4-78P-201ENST00000410940 126 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RPS3AP3-201ENST00000411933 242 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXA1P49639 RPS12P23-201ENST00000419579 400 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 UQCRBP1-201ENST00000421129 336 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA1P49639 RPS3AP44-201ENST00000425466 790 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC011998.1-201ENST00000433403 117 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 MTND1P4-201ENST00000435196 415 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 PGBD4P3-201ENST00000440731 581 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AL033528.1-201ENST00000453780 140 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RPS20P32-201ENST00000456044 356 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RPL32P9-201ENST00000487963 407 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC012170.1-201ENST00000495139 359 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AF213884.2-201ENST00000510417 903 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 SNORA18.6-201ENST00000516792 115 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 RNU6-714P-201ENST00000516963 103 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HOXA1P49639 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC022878.1-201ENST00000530684 149 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXA1P49639 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA1P49639 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA1P49639 AL157394.1-201ENST00000562983 1224 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 EIF1P4-201ENST00000572664 335 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC006329.2-201ENST00000611491 394 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC087241.4-201ENST00000612441 480 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AL021997.2-201ENST00000615674 271 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 MIR6891-201ENST00000618788 93 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA1P49639 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA1P49639 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AC110994.2-201ENST00000635481 492 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA1P49639 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXA1P49639 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA1P49639 AC097714.1-201ENST00000511272 1647 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 ZNF734P-201ENST00000419494 1534 ntBASIC3.44□□□□□ -1.86
HOXA1P49639 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA1P49639 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA1P49639 RNY4P34-201ENST00000364779 95 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 SNORA70E-201ENST00000384492 135 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC078974.1-201ENST00000411597 223 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA1P49639 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA1P49639 Z97055.1-201ENST00000419730 712 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RPL31P12-201ENST00000422587 358 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 RPL7AP25-201ENST00000423357 805 ntBASIC3.43□□□□□ -1.86
HOXA1P49639 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms