Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL356473.1-201ENST00000406203 1408 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC104454.1-201ENST00000421341 1401 ntBASIC3.62□□□□□ -1.83
LHX1P48742 OR4G11P-202ENST00000642116 1414 ntBASIC3.62□□□□□ -1.83
LHX1P48742 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LHX1P48742 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LHX1P48742 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 MIR208A-201ENST00000362287 71 ntBASIC3.62□□□□□ -1.83
LHX1P48742 RNA5SP258-201ENST00000362750 119 ntBASIC3.62□□□□□ -1.83
LHX1P48742 RNU6-1249P-201ENST00000363237 111 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 RHEBP3-201ENST00000411920 351 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 AC005005.2-201ENST00000420779 380 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AL159169.1-201ENST00000421119 127 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 MTCYBP34-201ENST00000439552 670 ntBASIC3.62□□□□□ -1.83
LHX1P48742 HSPE1P28-201ENST00000443139 211 ntBASIC3.62□□□□□ -1.83
LHX1P48742 ARPC3P5-201ENST00000448802 534 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 USP9YP10-201ENST00000454868 628 ntBASIC3.62□□□□□ -1.83
LHX1P48742 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 SUMO2P2-201ENST00000456482 255 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 AL139824.2-201ENST00000458731 1095 ntBASIC3.62□□□□□ -1.83
LHX1P48742 RNU7-136P-201ENST00000458819 69 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC091153.1-201ENST00000466297 402 ntBASIC3.62□□□□□ -1.83
LHX1P48742 RN7SL601P-201ENST00000471221 293 ntBASIC3.62□□□□□ -1.83
LHX1P48742 FAM172BP-201ENST00000487497 1089 ntBASIC3.62□□□□□ -1.83
LHX1P48742 MTCYBP35-201ENST00000503630 1137 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.62□□□□□ -1.83
LHX1P48742 AC112198.1-201ENST00000505369 1220 ntBASIC3.62□□□□□ -1.83
LHX1P48742 HSPD1P15-201ENST00000505573 1122 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LHX1P48742 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.62□□□□□ -1.83
LHX1P48742 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.62□□□□□ -1.83
LHX1P48742 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.62□□□□□ -1.83
LHX1P48742 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.62□□□□□ -1.83
LHX1P48742 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.62□□□□□ -1.83
LHX1P48742 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 AC007179.3-201ENST00000604976 235 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 AL136981.2-201ENST00000617319 734 ntBASIC3.62□□□□□ -1.83
LHX1P48742 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.62□□□□□ -1.83
LHX1P48742 Z83843.1-201ENST00000604070 3685 ntBASIC3.62□□□□□ -1.83
LHX1P48742 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.61□□□□□ -1.83
LHX1P48742 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.61□□□□□ -1.83
LHX1P48742 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 RPL23AP57-201ENST00000332361 466 ntBASIC3.61□□□□□ -1.83
LHX1P48742 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LHX1P48742 RNU6-931P-201ENST00000363850 107 ntBASIC3.61□□□□□ -1.83
LHX1P48742 SNORA70.4-201ENST00000365509 134 ntBASIC3.61□□□□□ -1.83
LHX1P48742 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LHX1P48742 RSL24D1P4-201ENST00000400938 484 ntBASIC3.61□□□□□ -1.83
LHX1P48742 MTND4P13-201ENST00000402078 1023 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AL136116.1-201ENST00000403591 381 ntBASIC3.61□□□□□ -1.83
LHX1P48742 EI24P1-201ENST00000416584 867 ntBASIC3.61□□□□□ -1.83
LHX1P48742 MTATP6P27-201ENST00000416987 621 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.61□□□□□ -1.83
LHX1P48742 AL008629.1-201ENST00000438615 184 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.61□□□□□ -1.83
LHX1P48742 AC104978.1-201ENST00000449387 391 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC097262.1-201ENST00000452559 548 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 AL445669.2-201ENST00000454425 421 ntBASIC3.61□□□□□ -1.83
LHX1P48742 SNRPGP5-201ENST00000456003 220 ntBASIC3.61□□□□□ -1.83
LHX1P48742 BTF3P5-201ENST00000457252 467 ntBASIC3.61□□□□□ -1.83
LHX1P48742 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.61□□□□□ -1.83
LHX1P48742 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.61□□□□□ -1.83
LHX1P48742 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC098862.1-201ENST00000504991 413 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 AC006390.1-201ENST00000508068 283 ntBASIC3.61□□□□□ -1.83
LHX1P48742 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LHX1P48742 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.61□□□□□ -1.83
LHX1P48742 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 AP004371.1-201ENST00000525240 214 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.61□□□□□ -1.83
LHX1P48742 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 AC009094.1-201ENST00000564443 426 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AC006270.2-201ENST00000578523 652 ntBASIC3.61□□□□□ -1.83
LHX1P48742 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.61□□□□□ -1.83
LHX1P48742 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.61□□□□□ -1.83
LHX1P48742 AC006539.2-201ENST00000601729 572 ntBASIC3.61□□□□□ -1.83
LHX1P48742 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.61□□□□□ -1.83
LHX1P48742 AC018755.4-201ENST00000619715 454 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms