Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 AC122134.1-202ENST00000569111 1201 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 MIR3944-201ENST00000581277 108 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 MAGOH2P-202ENST00000584384 429 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 VN1R87P-201ENST00000596706 487 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 SRGNP1-201ENST00000603392 451 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 AC124016.2-201ENST00000610058 665 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 AL512427.1-201ENST00000618593 349 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSNK1A1P48729 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSNK1A1P48729 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CSNK1A1P48729 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSNK1A1P48729 CUL1P1-201ENST00000509510 2425 ntBASIC2.77□□□□□ -1.97
CSNK1A1P48729 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CSNK1A1P48729 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSNK1A1P48729 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSNK1A1P48729 RNU6-251P-201ENST00000363235 104 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 RNU6-839P-201ENST00000363347 108 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 SNORA7.4-201ENST00000384249 137 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC110754.1-201ENST00000399740 601 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AL031121.1-201ENST00000406553 254 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 Z93242.1-201ENST00000427102 353 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 RPL23AP16-201ENST00000441715 421 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 NDUFA5P7-201ENST00000452914 242 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 MRPL42P4-201ENST00000453267 443 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 RN7SL807P-201ENST00000470923 297 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC093278.1-201ENST00000494700 600 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 RNA5SP385-201ENST00000515947 110 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSNK1A1P48729 SNRPGP16-201ENST00000533275 226 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AP005205.1-201ENST00000563503 508 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AP002802.2-201ENST00000605877 235 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC009570.1-201ENST00000609599 745 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC100793.4-201ENST00000613683 429 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 MIR6076-201ENST00000617521 113 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC009318.4-201ENST00000620496 486 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC018692.3-201ENST00000623929 123 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AP002371.2-201ENST00000624450 503 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC080188.3-201ENST00000624842 748 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC126544.2-201ENST00000625174 749 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC090897.3-201ENST00000636973 1157 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CSNK1A1P48729 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSNK1A1P48729 AC008264.2-201ENST00000610193 3731 ntBASIC2.76□□□□□ -1.97
CSNK1A1P48729 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSNK1A1P48729 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSNK1A1P48729 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 U3.6-201ENST00000363622 211 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 SNORA38.1-201ENST00000364172 131 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 SNORA51.4-201ENST00000364993 124 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 RPL7P25-201ENST00000404151 721 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 RN7SKP58-201ENST00000411010 305 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 AC245054.2-201ENST00000415639 319 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 SDCBPP3-201ENST00000419629 891 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 AL035410.1-201ENST00000427409 427 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.75□□□□□ -1.97
CSNK1A1P48729 AC011242.1-201ENST00000433596 1158 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 SETP8-201ENST00000435341 628 ntBASIC2.75□□□□□ -1.97
CSNK1A1P48729 AC127537.2-201ENST00000439258 465 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms