Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
CHRNA4P43681 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CHRNA4P43681 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.46□□□□□ -1.54
CHRNA4P43681 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA4P43681 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CHRNA4P43681 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CHRNA4P43681 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 HSPA8P18-201ENST00000439846 1928 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNA5SP319-201ENST00000362768 119 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU6-984P-201ENST00000363236 109 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU4-50P-201ENST00000364361 141 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 Y_RNA.269-201ENST00000364685 89 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU4-42P-201ENST00000364738 142 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNA5SP219-201ENST00000390940 113 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 HMGB3P7-201ENST00000400214 611 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AC097374.1-203ENST00000400783 485 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AL356421.1-201ENST00000403255 413 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AL603910.2-201ENST00000407268 136 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU6-1203P-201ENST00000410703 110 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RN7SKP126-201ENST00000411143 300 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.45□□□□□ -1.54
CHRNA4P43681 RPL7P37-201ENST00000425095 738 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 PRUNEP1-201ENST00000425846 705 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AL360081.1-201ENST00000428299 555 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.45□□□□□ -1.54
CHRNA4P43681 NOTCH2P1-201ENST00000443481 624 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 RN7SL51P-201ENST00000468230 285 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AC021205.1-201ENST00000468797 348 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AC100832.1-201ENST00000471945 383 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AL049830.2-201ENST00000480072 201 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RN7SL101P-201ENST00000496350 279 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 RNA5SP362-201ENST00000516048 118 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU7-200P-201ENST00000516105 62 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 RNU6-397P-201ENST00000516226 104 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 SCARNA16.4-201ENST00000516956 187 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.45□□□□□ -1.54
CHRNA4P43681 LARP7P2-201ENST00000575306 125 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 AC074029.4-201ENST00000624796 1859 ntBASIC5.45□□□□□ -1.54
CHRNA4P43681 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CHRNA4P43681 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CHRNA4P43681 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CHRNA4P43681 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 RNU6-179P-201ENST00000363350 107 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 RNU5A-8P-201ENST00000364102 114 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 RN7SKP81-201ENST00000365603 331 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHRNA4P43681 RNU2-33P-201ENST00000410344 192 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 RNU4-46P-201ENST00000410818 138 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 RPL21P38-201ENST00000418090 167 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 FTLP19-201ENST00000433300 394 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA4P43681 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.44□□□□□ -1.54
CHRNA4P43681 RPS15AP1-201ENST00000457423 391 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.44□□□□□ -1.54
CHRNA4P43681 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CHRNA4P43681 AL161747.1-201ENST00000480068 358 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 RN7SL547P-201ENST00000490793 290 ntBASIC5.44□□□□□ -1.54
CHRNA4P43681 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.44□□□□□ -1.54
CHRNA4P43681 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms