Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN4AP35499 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN4AP35499 TPMTP1-201ENST00000592307 737 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 AC040174.2-201ENST00000602701 465 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 AL671309.1-201ENST00000603750 544 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 MIR7973-1-201ENST00000614683 76 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 AC091948.2-201ENST00000636510 279 ntBASIC2.88□□□□□ -1.95
SCN4AP35499 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN4AP35499 API5P2-201ENST00000397055 1498 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SCN4AP35499 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN4AP35499 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN4AP35499 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN4AP35499 SNORD51.1-201ENST00000365405 77 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN4AP35499 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.87□□□□□ -1.95
SCN4AP35499 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN4AP35499 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.87□□□□□ -1.95
SCN4AP35499 RPL23AP49-201ENST00000492925 468 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN4AP35499 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN4AP35499 OR8K2P-201ENST00000524645 927 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN4AP35499 OR5BN1P-201ENST00000532955 829 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 AC023158.1-201ENST00000561632 1025 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 AC026464.5-201ENST00000562497 722 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN4AP35499 MIR4498-201ENST00000577599 66 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN4AP35499 AC103710.2-201ENST00000609912 942 ntBASIC2.87□□□□□ -1.95
SCN4AP35499 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN4AP35499 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SCN4AP35499 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SCN4AP35499 U8.13-201ENST00000390842 128 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SCN4AP35499 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 RSL24D1P8-201ENST00000434442 492 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AL354710.1-201ENST00000453641 246 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN4AP35499 AC026436.1-201ENST00000510537 270 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN4AP35499 AC133963.2-201ENST00000513686 578 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN4AP35499 HMGB1P46-201ENST00000520062 610 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN4AP35499 AC015726.3-201ENST00000624501 418 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN4AP35499 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SCN4AP35499 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN4AP35499 RNU1-91P-201ENST00000364746 163 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 HMGB1P13-201ENST00000406019 642 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 RPL23AP74-201ENST00000437246 471 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN4AP35499 AC009961.3-201ENST00000449832 765 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AP001086.1-201ENST00000494882 321 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 RNU6-826P-201ENST00000516827 104 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN4AP35499 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN4AP35499 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN4AP35499 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN4AP35499 POLR2KP1-201ENST00000553226 168 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 MIR5092-201ENST00000583139 88 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AP004247.3-201ENST00000608682 624 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 AC046143.2-201ENST00000609789 160 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 MIR6845-201ENST00000613182 61 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 GTF2H2B-203ENST00000508065 1432 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN4AP35499 NSRP1P1-201ENST00000444067 1693 ntBASIC2.86□□□□□ -1.95
SCN4AP35499 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
SCN4AP35499 PHKBP1-201ENST00000450951 1951 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 SNORA64-201ENST00000384674 134 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN4AP35499 MTCO3P4-201ENST00000419236 787 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AC073464.3-201ENST00000422564 712 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN4AP35499 SETP8-201ENST00000435341 628 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AL590399.6-201ENST00000446396 307 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AC092685.1-201ENST00000447960 1243 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AL500527.1-201ENST00000448532 255 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 RNU6-1218P-201ENST00000458990 108 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN4AP35499 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN4AP35499 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN4AP35499 AP003049.1-201ENST00000529418 457 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN4AP35499 DCAF13P3-201ENST00000561147 1334 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 CBX3P2-202ENST00000583365 535 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN4AP35499 AC079610.2-201ENST00000604818 690 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 AC024595.1-201ENST00000623088 387 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN4AP35499 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SCN4AP35499 AC010329.2-201ENST00000595195 2737 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 MTND5P7-201ENST00000413558 1798 ntBASIC2.85□□□□□ -1.95
SCN4AP35499 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 Y_RNA.118-201ENST00000363300 101 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN4AP35499 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
SCN4AP35499 RN7SKP32-201ENST00000410167 303 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms