Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MAPK10-266ENST00000641066 6555 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 TPTE2P4-201ENST00000258589 1605 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 RNU6ATAC-201ENST00000408749 126 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CASQ1P31415 RNU4-47P-201ENST00000410876 114 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.01□□□□□ -1.93
CASQ1P31415 AC233981.1-201ENST00000423224 461 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.01□□□□□ -1.93
CASQ1P31415 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.01□□□□□ -1.93
CASQ1P31415 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 NUTF2P7-201ENST00000453086 375 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AL109741.2-201ENST00000455561 343 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.01□□□□□ -1.93
CASQ1P31415 snoU109.4-201ENST00000458953 143 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 RPS27P26-201ENST00000494583 239 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 RNA5SP367-201ENST00000516557 118 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AC068339.2-201ENST00000534395 618 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.01□□□□□ -1.93
CASQ1P31415 NRBF2P5-201ENST00000603087 788 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 DUXAP3-201ENST00000603616 594 ntBASIC3.01□□□□□ -1.93
CASQ1P31415 AC009501.3-201ENST00000605001 1352 ntBASIC3□□□□□ -1.93
CASQ1P31415 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3□□□□□ -1.93
CASQ1P31415 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3□□□□□ -1.93
CASQ1P31415 RNU6-40P-201ENST00000384254 107 ntBASIC3□□□□□ -1.93
CASQ1P31415 UBE2V1P11-201ENST00000411559 285 ntBASIC3□□□□□ -1.93
CASQ1P31415 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3□□□□□ -1.93
CASQ1P31415 AC245052.5-201ENST00000416320 649 ntBASIC3□□□□□ -1.93
CASQ1P31415 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3□□□□□ -1.93
CASQ1P31415 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3□□□□□ -1.93
CASQ1P31415 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3□□□□□ -1.93
CASQ1P31415 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3□□□□□ -1.93
CASQ1P31415 CR769767.1-201ENST00000436337 346 ntBASIC3□□□□□ -1.93
CASQ1P31415 ARPC3P1-201ENST00000437218 533 ntBASIC3□□□□□ -1.93
CASQ1P31415 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3□□□□□ -1.93
CASQ1P31415 RNU6-1095P-201ENST00000516148 108 ntBASIC3□□□□□ -1.93
CASQ1P31415 AC026403.1-201ENST00000518938 295 ntBASIC3□□□□□ -1.93
CASQ1P31415 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3□□□□□ -1.93
CASQ1P31415 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3□□□□□ -1.93
CASQ1P31415 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3□□□□□ -1.93
CASQ1P31415 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3□□□□□ -1.93
CASQ1P31415 AC010546.1-201ENST00000569391 485 ntBASIC3□□□□□ -1.93
CASQ1P31415 ZNF861P-201ENST00000588126 639 ntBASIC3□□□□□ -1.93
CASQ1P31415 OR1M4P-201ENST00000589199 287 ntBASIC3□□□□□ -1.93
CASQ1P31415 VN1R88P-201ENST00000596787 292 ntBASIC3□□□□□ -1.93
CASQ1P31415 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
CASQ1P31415 AC010738.1-201ENST00000604970 987 ntBASIC3□□□□□ -1.93
CASQ1P31415 AC079791.1-201ENST00000605356 973 ntBASIC3□□□□□ -1.93
CASQ1P31415 AC098679.5-201ENST00000624394 571 ntBASIC3□□□□□ -1.93
CASQ1P31415 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CASQ1P31415 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3□□□□□ -1.93
CASQ1P31415 AL359693.1-201ENST00000614959 2407 ntBASIC3□□□□□ -1.93
CASQ1P31415 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
CASQ1P31415 AL512283.1-201ENST00000606756 1384 ntBASIC3□□□□□ -1.93
CASQ1P31415 OR5BR1P-201ENST00000524992 1330 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CASQ1P31415 MIR26A1-201ENST00000362205 77 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 SNORA67.1-201ENST00000364749 141 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 OR4K11P-201ENST00000431829 904 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.99□□□□□ -1.93
CASQ1P31415 AL513043.1-201ENST00000439124 535 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.99□□□□□ -1.93
CASQ1P31415 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.99□□□□□ -1.93
CASQ1P31415 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.99□□□□□ -1.93
CASQ1P31415 RPL31P41-201ENST00000477967 372 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.99□□□□□ -1.93
CASQ1P31415 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.99□□□□□ -1.93
CASQ1P31415 OR4R1P-201ENST00000529879 463 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
CASQ1P31415 HMGB1P14-201ENST00000557424 591 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.99□□□□□ -1.93
CASQ1P31415 AL160237.3-201ENST00000604114 1013 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 AC004852.3-201ENST00000614131 326 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 AC009032.1-201ENST00000617574 431 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 FRG1HP-204ENST00000617940 757 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
CASQ1P31415 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CASQ1P31415 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CASQ1P31415 AC080100.1-201ENST00000624239 5356 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 RNA5SP27-201ENST00000363839 119 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 SNORD82-201ENST00000365530 70 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 SNORA54-201ENST00000384281 123 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 RPS4XP7-201ENST00000406274 780 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 RN7SKP263-201ENST00000411194 309 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 AC080125.1-201ENST00000414888 684 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.98□□□□□ -1.93
CASQ1P31415 AC007389.2-201ENST00000434630 306 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.98□□□□□ -1.93
CASQ1P31415 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.98□□□□□ -1.93
CASQ1P31415 AC009220.1-201ENST00000451614 275 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 TRBV26-201ENST00000456572 344 ntBASIC2.98□□□□□ -1.93
CASQ1P31415 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.98□□□□□ -1.93
CASQ1P31415 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms