Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC13P31276 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC13P31276 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 RNU6-173P-201ENST00000364215 104 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXC13P31276 RNU6-657P-201ENST00000383904 107 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 RNU6-1074P-201ENST00000383995 104 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 NDUFB4P4-201ENST00000404822 243 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 GLRXP1-201ENST00000423261 334 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 MTND1P1-201ENST00000445453 368 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HOXC13P31276 MTND1P29-201ENST00000448112 647 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXC13P31276 RPL23AP31-201ENST00000456160 467 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC13P31276 HMGN2P13-201ENST00000476476 274 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 OR4G11P-201ENST00000492842 939 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AL358832.1-201ENST00000497800 389 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC004069.2-201ENST00000505438 1114 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 KLHL2P1-201ENST00000508691 521 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC13P31276 ARL2BPP6-201ENST00000512757 439 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AL139174.1-201ENST00000531489 886 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC13P31276 PIGPP4-201ENST00000584447 307 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC13P31276 AL031985.2-201ENST00000600955 480 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 BNIP3P11-201ENST00000603878 563 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AL133507.1-201ENST00000605269 557 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC016877.3-201ENST00000606778 504 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC002076.2-201ENST00000617362 122 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXC13P31276 AC006111.3-201ENST00000622137 383 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC13P31276 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
HOXC13P31276 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC13P31276 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC13P31276 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC13P31276 SNORA40.2-201ENST00000390847 128 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 ARF4P3-201ENST00000397387 509 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 AC012065.2-201ENST00000421295 375 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 MOB1AP1-201ENST00000430903 535 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 CYCSP35-201ENST00000451978 304 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 RPL21P8-201ENST00000465083 535 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 MTCYBP16-201ENST00000509187 1129 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC13P31276 RNU6-1225P-201ENST00000516336 65 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 SNORD59.2-201ENST00000516873 68 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXC13P31276 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 AC126177.3-201ENST00000551839 688 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXC13P31276 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXC13P31276 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 AC020914.4-201ENST00000597690 277 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC010620.1-201ENST00000601088 1102 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC009220.3-201ENST00000604318 586 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC13P31276 AC091304.6-201ENST00000619761 202 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC068792.1-201ENST00000621354 417 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC040168.1-201ENST00000623594 991 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC091905.1-201ENST00000624400 311 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXC13P31276 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC13P31276 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXC13P31276 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXC13P31276 AC103988.1-201ENST00000566382 2177 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 AC090740.1-201ENST00000623193 2262 ntBASIC3.86□□□□□ -1.79
HOXC13P31276 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC13P31276 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC13P31276 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC13P31276 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC13P31276 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC13P31276 LINC00561-201ENST00000565815 2738 ntBASIC3.85□□□□□ -1.79
HOXC13P31276 RNA5SP72-201ENST00000364442 117 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms