Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA9P31269 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXA9P31269 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA9P31269 RNU6-1339P-201ENST00000363574 91 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 DYNLT3P1-201ENST00000378574 347 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 SNORA18.3-201ENST00000384122 132 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 MRPL50P2-201ENST00000416821 482 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AC012498.1-201ENST00000424037 437 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 OR2B8P-201ENST00000432841 938 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 AC092170.1-201ENST00000440211 356 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 HMGB1P15-201ENST00000453854 435 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AC104689.1-201ENST00000473356 768 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 RPL7L1P13-201ENST00000511702 739 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 SNORA31.26-201ENST00000517250 137 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AC103783.1-201ENST00000520506 373 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.05□□□□□ -1.92
HOXA9P31269 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HOXA9P31269 AC011611.5-201ENST00000552477 578 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.05□□□□□ -1.92
HOXA9P31269 AC007566.2-201ENST00000603642 413 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 BNIP3P31-201ENST00000604515 566 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 VIS1.1-201ENST00000610517 203 ntBASIC3.05□□□□□ -1.92
HOXA9P31269 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.05□□□□□ -1.92
HOXA9P31269 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA9P31269 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HOXA9P31269 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXA9P31269 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HOXA9P31269 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
HOXA9P31269 ZNF37BP-203ENST00000452306 1352 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL136360.1-201ENST00000503377 1900 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 U6.112-201ENST00000384129 70 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL355615.1-201ENST00000406187 641 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL355143.1-201ENST00000407101 841 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 AC246680.2-201ENST00000422106 389 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 RPS7P2-201ENST00000435134 607 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 UBE2V1P5-201ENST00000440070 405 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 HMGB3P6-201ENST00000444896 598 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL109933.2-201ENST00000452651 260 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 NPM1P13-201ENST00000452663 865 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXA9P31269 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.04□□□□□ -1.92
HOXA9P31269 RPS17P11-201ENST00000474297 293 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
HOXA9P31269 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.04□□□□□ -1.92
HOXA9P31269 AC023824.3-201ENST00000569003 562 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AC015871.2-201ENST00000603605 948 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 BNIP3P4-201ENST00000604946 565 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AC092953.2-201ENST00000608000 699 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AC107294.3-201ENST00000609211 526 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AC007275.1-201ENST00000621243 671 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AL138955.1-201ENST00000622881 1040 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 AC006963.1-201ENST00000624003 1052 ntBASIC3.04□□□□□ -1.92
HOXA9P31269 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA9P31269 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA9P31269 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA9P31269 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
HOXA9P31269 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA9P31269 RNA5SP126-201ENST00000365092 109 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 MIR9-1-201ENST00000385198 89 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 RPS4XP8-201ENST00000402039 771 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 OR2AS1P-201ENST00000427827 319 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 AC012497.1-201ENST00000429392 575 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA9P31269 MTND1P33-201ENST00000446251 917 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AL929288.2-201ENST00000446368 407 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 OR51B8P-201ENST00000449892 769 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 NIPA2P5-201ENST00000452282 464 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA9P31269 RNU7-140P-201ENST00000459546 60 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXA9P31269 AC108860.1-201ENST00000484521 383 ntBASIC3.03□□□□□ -1.92
HOXA9P31269 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.03□□□□□ -1.92
HOXA9P31269 AC118282.1-201ENST00000506408 765 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms