Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RXRBP28702 ERCC6-202ENST00000374127 1782 ntBASIC5.9□□□□□ -1.46
RXRBP28702 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RXRBP28702 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RXRBP28702 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RXRBP28702 RN7SKP185-201ENST00000362813 326 ntBASIC5.9□□□□□ -1.46
RXRBP28702 Y_RNA.259-201ENST00000364619 101 ntBASIC5.9□□□□□ -1.46
RXRBP28702 MIR137-201ENST00000385223 102 ntBASIC5.9□□□□□ -1.46
RXRBP28702 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AL121972.1-201ENST00000402023 252 ntBASIC5.9□□□□□ -1.46
RXRBP28702 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RXRBP28702 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.9□□□□□ -1.46
RXRBP28702 AL139095.3-201ENST00000419672 1203 ntBASIC5.9□□□□□ -1.46
RXRBP28702 RPL7P4-203ENST00000430239 730 ntBASIC5.9□□□□□ -1.46
RXRBP28702 COX6B1P7-201ENST00000430845 235 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.9□□□□□ -1.46
RXRBP28702 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 AL356276.2-201ENST00000435919 558 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.9□□□□□ -1.46
RXRBP28702 RPS15AP9-201ENST00000439856 381 ntBASIC5.9□□□□□ -1.46
RXRBP28702 RPS27AP15-201ENST00000447672 466 ntBASIC5.9□□□□□ -1.46
RXRBP28702 PRDX3P3-201ENST00000447765 522 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 RNU6-261P-201ENST00000459506 102 ntBASIC5.9□□□□□ -1.46
RXRBP28702 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.9□□□□□ -1.46
RXRBP28702 AC090096.1-201ENST00000489168 390 ntBASIC5.9□□□□□ -1.46
RXRBP28702 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.9□□□□□ -1.46
RXRBP28702 AC074250.1-201ENST00000511117 192 ntBASIC5.9□□□□□ -1.46
RXRBP28702 RNU6-794P-201ENST00000517261 64 ntBASIC5.9□□□□□ -1.46
RXRBP28702 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.9□□□□□ -1.46
RXRBP28702 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.9□□□□□ -1.46
RXRBP28702 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RXRBP28702 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.9□□□□□ -1.46
RXRBP28702 AL359219.2-201ENST00000555184 348 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.9□□□□□ -1.46
RXRBP28702 AC010525.2-201ENST00000590920 195 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC010680.4-201ENST00000605334 543 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC008966.2-201ENST00000606157 453 ntBASIC5.9□□□□□ -1.46
RXRBP28702 RNU6-87P-201ENST00000607561 108 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AL356585.4-201ENST00000623078 1229 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC145207.9-201ENST00000623802 325 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AC138965.3-201ENST00000623875 498 ntBASIC5.9□□□□□ -1.46
RXRBP28702 AL078596.1-201ENST00000624856 447 ntBASIC5.9□□□□□ -1.46
RXRBP28702 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
RXRBP28702 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.9□□□□□ -1.47
RXRBP28702 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.89□□□□□ -1.47
RXRBP28702 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.89□□□□□ -1.47
RXRBP28702 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 Y_RNA.384-201ENST00000383909 102 ntBASIC5.89□□□□□ -1.47
RXRBP28702 Y_RNA.387-201ENST00000383918 102 ntBASIC5.89□□□□□ -1.47
RXRBP28702 AL356057.3-201ENST00000402607 340 ntBASIC5.89□□□□□ -1.47
RXRBP28702 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.89□□□□□ -1.47
RXRBP28702 RNU2-22P-201ENST00000411266 212 ntBASIC5.89□□□□□ -1.47
RXRBP28702 AC245054.2-201ENST00000415639 319 ntBASIC5.89□□□□□ -1.47
RXRBP28702 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.89□□□□□ -1.47
RXRBP28702 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.89□□□□□ -1.47
RXRBP28702 CACYBPP1-201ENST00000438592 684 ntBASIC5.89□□□□□ -1.47
RXRBP28702 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.89□□□□□ -1.47
RXRBP28702 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.89□□□□□ -1.47
RXRBP28702 BTF3P12-201ENST00000519620 469 ntBASIC5.89□□□□□ -1.47
RXRBP28702 AC022884.2-201ENST00000578535 580 ntBASIC5.89□□□□□ -1.47
RXRBP28702 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.89□□□□□ -1.47
RXRBP28702 AC243773.3-201ENST00000613270 256 ntBASIC5.89□□□□□ -1.47
RXRBP28702 AC040168.1-201ENST00000623594 991 ntBASIC5.89□□□□□ -1.47
RXRBP28702 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.89□□□□□ -1.47
RXRBP28702 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RXRBP28702 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.89□□□□□ -1.47
RXRBP28702 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.89□□□□□ -1.47
RXRBP28702 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
RXRBP28702 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RXRBP28702 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.89□□□□□ -1.47
RXRBP28702 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.88□□□□□ -1.47
RXRBP28702 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RXRBP28702 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.88□□□□□ -1.47
RXRBP28702 AL136164.3-201ENST00000624429 3978 ntBASIC5.88□□□□□ -1.47
RXRBP28702 AC046144.1-201ENST00000478559 1853 ntBASIC5.88□□□□□ -1.47
RXRBP28702 CASC19-284ENST00000642142 1868 ntBASIC5.88□□□□□ -1.47
RXRBP28702 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RXRBP28702 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.88□□□□□ -1.47
RXRBP28702 RNU6-223P-201ENST00000362830 107 ntBASIC5.88□□□□□ -1.47
RXRBP28702 SNORA62.2-201ENST00000364672 152 ntBASIC5.88□□□□□ -1.47
RXRBP28702 RNU6-1318P-201ENST00000365389 103 ntBASIC5.88□□□□□ -1.47
RXRBP28702 MIR568-201ENST00000385036 95 ntBASIC5.88□□□□□ -1.47
RXRBP28702 RNU6-510P-201ENST00000391239 108 ntBASIC5.88□□□□□ -1.47
RXRBP28702 RPL7P25-201ENST00000404151 721 ntBASIC5.88□□□□□ -1.47
RXRBP28702 Y_RNA.605-201ENST00000410577 105 ntBASIC5.88□□□□□ -1.47
RXRBP28702 RPL6P29-201ENST00000414863 865 ntBASIC5.88□□□□□ -1.47
RXRBP28702 AC113618.1-201ENST00000416747 285 ntBASIC5.88□□□□□ -1.47
RXRBP28702 SRIP2-201ENST00000428470 166 ntBASIC5.88□□□□□ -1.47
RXRBP28702 AC236972.1-201ENST00000433225 199 ntBASIC5.88□□□□□ -1.47
RXRBP28702 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms