Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC112204.1-201ENST00000502591 103 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 IGKV2D-23-201ENST00000518179 286 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.82□□□□□ -1.8
ABCD3P28288 AC107016.1-201ENST00000550463 337 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 AL391156.1-201ENST00000554965 554 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.82□□□□□ -1.8
ABCD3P28288 MIR4697-201ENST00000582977 78 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AL031985.2-201ENST00000600955 480 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AL031775.1-201ENST00000607014 887 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC097065.2-201ENST00000608159 533 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC004908.3-201ENST00000610248 625 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC064801.1-201ENST00000612025 407 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC095031.1-201ENST00000623685 672 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 AC073530.2-201ENST00000623987 261 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
ABCD3P28288 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCD3P28288 AC116667.1-201ENST00000604855 2072 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ABCD3P28288 DDX10P1-201ENST00000448545 1933 ntBASIC3.82□□□□□ -1.8
ABCD3P28288 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ABCD3P28288 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ABCD3P28288 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ABCD3P28288 MTND4P4-201ENST00000439033 1366 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ABCD3P28288 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ABCD3P28288 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
ABCD3P28288 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 SNORA26.8-201ENST00000391306 124 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 SKINT1L-201ENST00000401057 817 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AL022722.2-201ENST00000402519 180 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.81□□□□□ -1.8
ABCD3P28288 NPM1P11-201ENST00000417106 855 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC244035.1-201ENST00000430042 390 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC091390.1-201ENST00000433904 331 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC098826.1-201ENST00000433943 471 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC129850.1-201ENST00000436203 508 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC006011.1-201ENST00000442758 349 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 EPS15P1-201ENST00000448836 336 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 AC092754.2-201ENST00000463506 460 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC108860.1-201ENST00000484521 383 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC093824.1-201ENST00000508796 343 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 RNU6-798P-201ENST00000516912 103 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 NDUFA5P2-201ENST00000519723 344 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 HIGD1AP10-201ENST00000527837 282 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.81□□□□□ -1.8
ABCD3P28288 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.81□□□□□ -1.8
ABCD3P28288 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCD3P28288 AC068790.3-201ENST00000602988 553 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC020910.2-201ENST00000603635 610 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AL591034.3-201ENST00000605511 685 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC004908.2-201ENST00000609090 574 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 OR10AB1P-201ENST00000609613 938 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 MIR7151-201ENST00000617477 60 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 AP005264.7-201ENST00000625003 745 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCD3P28288 MIR492-201ENST00000638676 116 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
ABCD3P28288 MAPK10-253ENST00000641010 4072 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ABCD3P28288 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
ABCD3P28288 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCD3P28288 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.8□□□□□ -1.8
ABCD3P28288 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ABCD3P28288 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCD3P28288 DEFB108F-201ENST00000344638 222 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 RNU6-76P-201ENST00000384060 104 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 RNU6-432P-201ENST00000384196 109 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 RNU6-809P-201ENST00000384461 107 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 MTCYBP36-201ENST00000404146 440 ntBASIC3.8□□□□□ -1.8
ABCD3P28288 RPL21P32-201ENST00000419877 477 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms