Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC011477.1-204ENST00000623416 1325 ntBASIC3.99□□□□□ -1.77
BDNFP23560 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
BDNFP23560 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BDNFP23560 RNU6-1027P-201ENST00000383998 107 ntBASIC3.99□□□□□ -1.77
BDNFP23560 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
BDNFP23560 RSL24D1P1-201ENST00000404972 493 ntBASIC3.99□□□□□ -1.77
BDNFP23560 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 MTCYBP38-201ENST00000417160 1123 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC245054.1-201ENST00000420944 258 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.99□□□□□ -1.77
BDNFP23560 NANOGP5-201ENST00000424456 877 ntBASIC3.99□□□□□ -1.77
BDNFP23560 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 MTND2P24-201ENST00000453434 806 ntBASIC3.99□□□□□ -1.77
BDNFP23560 MEMO1P3-201ENST00000459811 302 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC084198.1-201ENST00000477747 402 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 AC006445.2-201ENST00000510061 472 ntBASIC3.99□□□□□ -1.77
BDNFP23560 SCARNA1-201ENST00000517138 166 ntBASIC3.99□□□□□ -1.77
BDNFP23560 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.99□□□□□ -1.77
BDNFP23560 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.99□□□□□ -1.77
BDNFP23560 AC023813.2-201ENST00000564321 469 ntBASIC3.99□□□□□ -1.77
BDNFP23560 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
BDNFP23560 SNORA62.6-201ENST00000606322 83 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AL392048.1-201ENST00000613946 534 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC091046.2-201ENST00000620775 665 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC009268.2-201ENST00000621925 457 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC008443.7-201ENST00000622195 246 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC010608.3-201ENST00000625048 527 ntBASIC3.99□□□□□ -1.77
BDNFP23560 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.99□□□□□ -1.77
BDNFP23560 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
BDNFP23560 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.99□□□□□ -1.77
BDNFP23560 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BDNFP23560 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.98□□□□□ -1.77
BDNFP23560 AC092447.10-201ENST00000620607 1652 ntBASIC3.98□□□□□ -1.77
BDNFP23560 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BDNFP23560 SNORA73.2-201ENST00000364946 201 ntBASIC3.98□□□□□ -1.77
BDNFP23560 RPL21P17-201ENST00000397467 475 ntBASIC3.98□□□□□ -1.77
BDNFP23560 RPL7P60-201ENST00000397636 735 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 AC090774.1-201ENST00000435925 246 ntBASIC3.98□□□□□ -1.77
BDNFP23560 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 MTND5P14-201ENST00000441481 1267 ntBASIC3.98□□□□□ -1.77
BDNFP23560 SETD6P1-201ENST00000444575 317 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AC009237.8-201ENST00000445492 379 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.98□□□□□ -1.77
BDNFP23560 DUXAP8-207ENST00000456786 622 ntBASIC3.98□□□□□ -1.77
BDNFP23560 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 AC134050.1-201ENST00000495088 933 ntBASIC3.98□□□□□ -1.77
BDNFP23560 UBE2V1P12-201ENST00000503954 474 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AC109464.2-201ENST00000510242 943 ntBASIC3.98□□□□□ -1.77
BDNFP23560 RNU1-95P-201ENST00000516357 160 ntBASIC3.98□□□□□ -1.77
BDNFP23560 RNU1-128P-201ENST00000516704 160 ntBASIC3.98□□□□□ -1.77
BDNFP23560 PAICSP4-201ENST00000517543 1253 ntBASIC3.98□□□□□ -1.77
BDNFP23560 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BDNFP23560 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.98□□□□□ -1.77
BDNFP23560 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.98□□□□□ -1.77
BDNFP23560 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BDNFP23560 SETP2-201ENST00000553886 926 ntBASIC3.98□□□□□ -1.77
BDNFP23560 NBEAP1-201ENST00000554452 979 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.98□□□□□ -1.77
BDNFP23560 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.98□□□□□ -1.77
BDNFP23560 RNU4-5P-201ENST00000607255 135 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AP003392.5-201ENST00000607857 415 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AC004067.1-201ENST00000608733 700 ntBASIC3.98□□□□□ -1.77
BDNFP23560 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.98□□□□□ -1.77
BDNFP23560 AC099778.2-201ENST00000610904 211 ntBASIC3.98□□□□□ -1.77
BDNFP23560 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
BDNFP23560 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.98□□□□□ -1.77
BDNFP23560 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
BDNFP23560 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BDNFP23560 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BDNFP23560 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
BDNFP23560 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BDNFP23560 RNU6-799P-201ENST00000363567 107 ntBASIC3.97□□□□□ -1.77
BDNFP23560 MIR200C-201ENST00000384980 68 ntBASIC3.97□□□□□ -1.77
BDNFP23560 MIR670-201ENST00000390142 98 ntBASIC3.97□□□□□ -1.77
BDNFP23560 AC007066.1-201ENST00000392902 381 ntBASIC3.97□□□□□ -1.77
BDNFP23560 EI24P2-201ENST00000397776 1076 ntBASIC3.97□□□□□ -1.77
BDNFP23560 AL356421.1-201ENST00000403255 413 ntBASIC3.97□□□□□ -1.77
BDNFP23560 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.97□□□□□ -1.77
BDNFP23560 AL035423.1-201ENST00000420331 213 ntBASIC3.97□□□□□ -1.77
BDNFP23560 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BDNFP23560 AL389915.1-201ENST00000422463 466 ntBASIC3.97□□□□□ -1.77
BDNFP23560 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.97□□□□□ -1.77
BDNFP23560 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.97□□□□□ -1.77
BDNFP23560 ZYG11AP1-201ENST00000430329 837 ntBASIC3.97□□□□□ -1.77
BDNFP23560 AC084290.1-201ENST00000434995 374 ntBASIC3.97□□□□□ -1.77
BDNFP23560 UBE2V1P13-201ENST00000436983 439 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms