Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL356473.1-201ENST00000406203 1408 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 Y_RNA.408-201ENST00000383987 102 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 SNORA1.3-201ENST00000384676 136 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 Z98941.1-201ENST00000407764 100 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 RPL27AP8-201ENST00000424277 446 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL451062.2-201ENST00000427515 271 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 TRIM60P18-201ENST00000441518 828 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL359385.1-201ENST00000456509 365 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 RNU6-583P-201ENST00000516012 92 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 DUXAP2-201ENST00000519198 589 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 OR5B10P-201ENST00000532869 642 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 YWHAZP1-201ENST00000556286 722 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AL357559.1-201ENST00000622228 274 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.86
HLA-DPA1P20036 AC017071.1-201ENST00000564407 2204 ntBASIC3.46□□□□□ -1.86
HLA-DPA1P20036 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 RNA5SP119-201ENST00000362715 117 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 SNORD17-201ENST00000390930 237 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AL355143.1-201ENST00000407101 841 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC068533.2-201ENST00000411872 306 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 RPL23AP82-202ENST00000427528 469 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC008264.1-201ENST00000447612 367 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC097262.1-201ENST00000452559 548 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 CENPBD1P1-201ENST00000464061 469 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 RPL21P8-201ENST00000465083 535 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC104164.3-201ENST00000467363 1258 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC034236.1-201ENST00000469891 373 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC113420.1-201ENST00000507903 571 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC091163.3-201ENST00000518269 1144 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC005832.3-201ENST00000537929 631 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 OR4T1P-201ENST00000554933 911 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AL132657.2-201ENST00000564417 358 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 MIR3922-201ENST00000585192 84 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC067852.3-201ENST00000589177 561 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC019176.2-201ENST00000611579 315 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 PART1_2.1-201ENST00000612397 250 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC012314.7-201ENST00000619693 93 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AC004808.1-201ENST00000627671 721 ntBASIC3.45□□□□□ -1.86
HLA-DPA1P20036 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DPA1P20036 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 DEFB108F-201ENST00000344638 222 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 SNORA14A-201ENST00000364773 135 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 AL031679.1-201ENST00000400616 525 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 RNU6-55P-201ENST00000411092 107 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 RNU6-954P-201ENST00000411355 107 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 Z99755.1-201ENST00000414048 380 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 AL592310.1-201ENST00000414330 671 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 MTCO2P5-201ENST00000422621 426 ntBASIC3.44□□□□□ -1.86
HLA-DPA1P20036 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DPA1P20036 MTCYBP45-201ENST00000435243 565 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms