Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC125611.1-201ENST00000549563 229 ntBASIC3.51□□□□□ -1.85
KRT3P12035 HIGD1AP17-201ENST00000554576 276 ntBASIC3.51□□□□□ -1.85
KRT3P12035 AC022662.1-201ENST00000580252 331 ntBASIC3.51□□□□□ -1.85
KRT3P12035 AC061975.8-201ENST00000587058 721 ntBASIC3.51□□□□□ -1.85
KRT3P12035 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
KRT3P12035 AL158042.1-201ENST00000605338 460 ntBASIC3.51□□□□□ -1.85
KRT3P12035 AC097478.2-201ENST00000610572 514 ntBASIC3.51□□□□□ -1.85
KRT3P12035 AC006133.1-201ENST00000617106 264 ntBASIC3.51□□□□□ -1.85
KRT3P12035 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.51□□□□□ -1.85
KRT3P12035 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.51□□□□□ -1.85
KRT3P12035 MIR1322-201ENST00000638013 71 ntBASIC3.51□□□□□ -1.85
KRT3P12035 AP002907.1-201ENST00000606361 1430 ntBASIC3.51□□□□□ -1.85
KRT3P12035 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 RNU1-75P-201ENST00000347264 129 ntBASIC3.5□□□□□ -1.85
KRT3P12035 RNU6-1249P-201ENST00000363237 111 ntBASIC3.5□□□□□ -1.85
KRT3P12035 Y_RNA.311-201ENST00000365068 96 ntBASIC3.5□□□□□ -1.85
KRT3P12035 MIR506-201ENST00000384998 124 ntBASIC3.5□□□□□ -1.85
KRT3P12035 RNU6-837P-201ENST00000391056 108 ntBASIC3.5□□□□□ -1.85
KRT3P12035 RNA5SP129-201ENST00000410276 118 ntBASIC3.5□□□□□ -1.85
KRT3P12035 RNU2-15P-201ENST00000410692 191 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC245052.5-201ENST00000416320 649 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC012065.2-201ENST00000421295 375 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.5□□□□□ -1.85
KRT3P12035 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.5□□□□□ -1.85
KRT3P12035 SNORA84-201ENST00000459229 133 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 RPS27AP1-201ENST00000475545 471 ntBASIC3.5□□□□□ -1.85
KRT3P12035 RPS4XP22-201ENST00000480755 780 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC093663.1-201ENST00000497190 394 ntBASIC3.5□□□□□ -1.85
KRT3P12035 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC006390.1-201ENST00000508068 283 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 RNU6-583P-201ENST00000516012 92 ntBASIC3.5□□□□□ -1.85
KRT3P12035 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
KRT3P12035 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.5□□□□□ -1.85
KRT3P12035 AC005476.1-201ENST00000554427 397 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 OR4K7P-201ENST00000580232 945 ntBASIC3.5□□□□□ -1.85
KRT3P12035 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.5□□□□□ -1.85
KRT3P12035 BNIP3P24-201ENST00000593398 557 ntBASIC3.5□□□□□ -1.85
KRT3P12035 uc_338.1-201ENST00000612113 180 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
KRT3P12035 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.5□□□□□ -1.85
KRT3P12035 SNORD39.4-201ENST00000620099 78 ntBASIC3.5□□□□□ -1.85
KRT3P12035 AC005183.1-201ENST00000603687 1979 ntBASIC3.5□□□□□ -1.85
KRT3P12035 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRT3P12035 NUP58P1-201ENST00000502546 1738 ntBASIC3.5□□□□□ -1.85
KRT3P12035 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT3P12035 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT3P12035 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRT3P12035 RNA5SP258-201ENST00000362750 119 ntBASIC3.49□□□□□ -1.85
KRT3P12035 MIR490-201ENST00000384865 128 ntBASIC3.49□□□□□ -1.85
KRT3P12035 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
KRT3P12035 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT3P12035 BX323014.1-201ENST00000412876 237 ntBASIC3.49□□□□□ -1.85
KRT3P12035 HSFY4P-201ENST00000415994 1181 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT3P12035 AC006960.1-201ENST00000419980 153 ntBASIC3.49□□□□□ -1.85
KRT3P12035 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
KRT3P12035 MTCO2P17-201ENST00000424336 677 ntBASIC3.49□□□□□ -1.85
KRT3P12035 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.49□□□□□ -1.85
KRT3P12035 PSMA6P3-201ENST00000428242 164 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT3P12035 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT3P12035 HMGB3P11-201ENST00000440127 604 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT3P12035 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT3P12035 AC005297.2-201ENST00000450430 606 ntBASIC3.49□□□□□ -1.85
KRT3P12035 BTF3P5-201ENST00000457252 467 ntBASIC3.49□□□□□ -1.85
KRT3P12035 HMGN1P18-201ENST00000457642 277 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.49□□□□□ -1.85
KRT3P12035 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRT3P12035 AC093281.2-201ENST00000510153 597 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AC079395.1-201ENST00000510981 262 ntBASIC3.49□□□□□ -1.85
KRT3P12035 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.49□□□□□ -1.85
KRT3P12035 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
KRT3P12035 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.49□□□□□ -1.85
KRT3P12035 UBE2NP1-201ENST00000545592 458 ntBASIC3.49□□□□□ -1.85
KRT3P12035 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.49□□□□□ -1.85
KRT3P12035 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms