Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC117529.2-201ENST00000512159 2068 ntBASIC3.43□□□□□ -1.86
TOP1P11387 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TOP1P11387 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TOP1P11387 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TOP1P11387 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.42□□□□□ -1.86
TOP1P11387 SNORA9.2-201ENST00000365361 133 ntBASIC3.42□□□□□ -1.86
TOP1P11387 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TOP1P11387 RNU6-730P-201ENST00000383954 104 ntBASIC3.42□□□□□ -1.86
TOP1P11387 AC104073.1-201ENST00000451988 151 ntBASIC3.42□□□□□ -1.86
TOP1P11387 RPL7P5-201ENST00000471472 736 ntBASIC3.42□□□□□ -1.86
TOP1P11387 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.42□□□□□ -1.86
TOP1P11387 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.42□□□□□ -1.86
TOP1P11387 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.42□□□□□ -1.86
TOP1P11387 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
TOP1P11387 SNORA31.1-201ENST00000515993 133 ntBASIC3.42□□□□□ -1.86
TOP1P11387 SNORA31.5-201ENST00000516190 133 ntBASIC3.42□□□□□ -1.86
TOP1P11387 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.42□□□□□ -1.86
TOP1P11387 AC092451.2-201ENST00000538746 658 ntBASIC3.42□□□□□ -1.86
TOP1P11387 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.42□□□□□ -1.86
TOP1P11387 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.42□□□□□ -1.86
TOP1P11387 BNIP3P19-201ENST00000605397 577 ntBASIC3.42□□□□□ -1.86
TOP1P11387 AC084824.5-201ENST00000612009 413 ntBASIC3.42□□□□□ -1.86
TOP1P11387 AC002076.2-201ENST00000617362 122 ntBASIC3.42□□□□□ -1.86
TOP1P11387 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TOP1P11387 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TOP1P11387 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOP1P11387 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOP1P11387 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TOP1P11387 AC108206.1-201ENST00000570186 4159 ntBASIC3.41□□□□□ -1.86
TOP1P11387 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 RNU6-792P-201ENST00000363490 107 ntBASIC3.41□□□□□ -1.86
TOP1P11387 SNORA80A-201ENST00000363922 136 ntBASIC3.41□□□□□ -1.86
TOP1P11387 RNU6-921P-201ENST00000384361 107 ntBASIC3.41□□□□□ -1.86
TOP1P11387 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.41□□□□□ -1.86
TOP1P11387 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.41□□□□□ -1.86
TOP1P11387 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.41□□□□□ -1.86
TOP1P11387 AL831737.1-201ENST00000441288 271 ntBASIC3.41□□□□□ -1.86
TOP1P11387 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.41□□□□□ -1.86
TOP1P11387 AL162389.1-201ENST00000449233 177 ntBASIC3.41□□□□□ -1.86
TOP1P11387 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.41□□□□□ -1.86
TOP1P11387 RPS17P11-201ENST00000474297 293 ntBASIC3.41□□□□□ -1.86
TOP1P11387 AP004217.1-201ENST00000480579 346 ntBASIC3.41□□□□□ -1.86
TOP1P11387 AC108860.1-201ENST00000484521 383 ntBASIC3.41□□□□□ -1.86
TOP1P11387 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.41□□□□□ -1.86
TOP1P11387 ERHP1-201ENST00000523006 310 ntBASIC3.41□□□□□ -1.86
TOP1P11387 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TOP1P11387 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
TOP1P11387 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 MTCO3P24-201ENST00000572729 782 ntBASIC3.41□□□□□ -1.86
TOP1P11387 COX6CP3-201ENST00000580869 223 ntBASIC3.41□□□□□ -1.86
TOP1P11387 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.41□□□□□ -1.86
TOP1P11387 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.41□□□□□ -1.86
TOP1P11387 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TOP1P11387 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
TOP1P11387 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
TOP1P11387 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TOP1P11387 U3.42-201ENST00000408746 214 ntBASIC3.4□□□□□ -1.87
TOP1P11387 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AL158825.1-201ENST00000414735 521 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC099677.1-201ENST00000420575 175 ntBASIC3.4□□□□□ -1.87
TOP1P11387 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.4□□□□□ -1.87
TOP1P11387 AL009174.1-201ENST00000426577 416 ntBASIC3.4□□□□□ -1.87
TOP1P11387 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.4□□□□□ -1.87
TOP1P11387 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.4□□□□□ -1.87
TOP1P11387 AL135938.1-201ENST00000443141 297 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.4□□□□□ -1.87
TOP1P11387 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.4□□□□□ -1.87
TOP1P11387 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.4□□□□□ -1.87
TOP1P11387 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.4□□□□□ -1.87
TOP1P11387 AP001486.1-201ENST00000463339 476 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC078857.1-201ENST00000469870 667 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC096751.1-202ENST00000502691 1067 ntBASIC3.4□□□□□ -1.87
TOP1P11387 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TOP1P11387 SNORA76.2-201ENST00000517095 137 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC124293.1-201ENST00000530034 493 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC018630.1-201ENST00000541376 925 ntBASIC3.4□□□□□ -1.87
TOP1P11387 LSM6P2-201ENST00000552208 177 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC079148.1-201ENST00000565944 819 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.4□□□□□ -1.87
TOP1P11387 AL137843.1-201ENST00000605078 385 ntBASIC3.4□□□□□ -1.87
TOP1P11387 AC006249.1-201ENST00000621223 471 ntBASIC3.4□□□□□ -1.87
TOP1P11387 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.39□□□□□ -1.87
TOP1P11387 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TOP1P11387 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
TOP1P11387 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TOP1P11387 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 RNU6-796P-201ENST00000391086 107 ntBASIC3.39□□□□□ -1.87
TOP1P11387 U3.26-201ENST00000391236 204 ntBASIC3.39□□□□□ -1.87
TOP1P11387 AL122016.1-201ENST00000403365 367 ntBASIC3.39□□□□□ -1.87
TOP1P11387 ATF1P1-201ENST00000406040 927 ntBASIC3.39□□□□□ -1.87
TOP1P11387 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.39□□□□□ -1.87
TOP1P11387 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 USP9YP36-201ENST00000424581 829 ntBASIC3.39□□□□□ -1.87
TOP1P11387 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.39□□□□□ -1.87
TOP1P11387 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms