Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.36□□□□□ -1.71
RHOP08100 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 AC130650.2-201ENST00000618736 2403 ntBASIC4.35□□□□□ -1.71
RHOP08100 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RHOP08100 GNG5P1-201ENST00000255500 204 ntBASIC4.35□□□□□ -1.71
RHOP08100 RNY4P34-201ENST00000364779 95 ntBASIC4.35□□□□□ -1.71
RHOP08100 RN7SKP285-201ENST00000410137 318 ntBASIC4.35□□□□□ -1.71
RHOP08100 RNU4-6P-201ENST00000410804 122 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 AL109913.1-201ENST00000421173 514 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHOP08100 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 AL358934.1-201ENST00000432346 324 ntBASIC4.35□□□□□ -1.71
RHOP08100 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 AC007389.2-201ENST00000434630 306 ntBASIC4.35□□□□□ -1.71
RHOP08100 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.35□□□□□ -1.71
RHOP08100 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 MTND4P25-201ENST00000441039 533 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL662791.1-201ENST00000441992 928 ntBASIC4.35□□□□□ -1.71
RHOP08100 RPS4XP4-201ENST00000443195 763 ntBASIC4.35□□□□□ -1.71
RHOP08100 MTND2P24-201ENST00000453434 806 ntBASIC4.35□□□□□ -1.71
RHOP08100 RPL38P1-201ENST00000460914 211 ntBASIC4.35□□□□□ -1.71
RHOP08100 RBM43P1-201ENST00000476891 1081 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC092989.1-201ENST00000481235 277 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC034222.1-201ENST00000494052 532 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC006390.1-201ENST00000508068 283 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC104057.1-201ENST00000515547 497 ntBASIC4.35□□□□□ -1.71
RHOP08100 RNA5SP360-201ENST00000516555 118 ntBASIC4.35□□□□□ -1.71
RHOP08100 RNU6-201P-201ENST00000517100 61 ntBASIC4.35□□□□□ -1.71
RHOP08100 AF186190.1-201ENST00000517470 480 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC022861.1-201ENST00000522981 663 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 AL157687.1-201ENST00000554853 619 ntBASIC4.35□□□□□ -1.71
RHOP08100 CENPUP2-201ENST00000555897 1186 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 BBIP1P1-201ENST00000602999 279 ntBASIC4.35□□□□□ -1.71
RHOP08100 AC008277.2-201ENST00000605196 797 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL008729.2-201ENST00000606393 473 ntBASIC4.35□□□□□ -1.71
RHOP08100 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RHOP08100 AC112200.1-201ENST00000625015 234 ntBASIC4.35□□□□□ -1.71
RHOP08100 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RHOP08100 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.35□□□□□ -1.71
RHOP08100 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.35□□□□□ -1.71
RHOP08100 AC139713.2-215ENST00000641428 5037 ntBASIC4.35□□□□□ -1.71
RHOP08100 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RHOP08100 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RHOP08100 AC116667.1-201ENST00000604855 2072 ntBASIC4.34□□□□□ -1.71
RHOP08100 LINC01109-201ENST00000603837 3081 ntBASIC4.34□□□□□ -1.71
RHOP08100 AL592182.3-201ENST00000642132 3304 ntBASIC4.34□□□□□ -1.71
RHOP08100 Y_RNA.46-201ENST00000362695 102 ntBASIC4.34□□□□□ -1.71
RHOP08100 RNA5SP391-201ENST00000363456 119 ntBASIC4.34□□□□□ -1.71
RHOP08100 RNU6-744P-201ENST00000365557 107 ntBASIC4.34□□□□□ -1.71
RHOP08100 Y_RNA.402-201ENST00000383972 102 ntBASIC4.34□□□□□ -1.71
RHOP08100 Y_RNA.453-201ENST00000384223 109 ntBASIC4.34□□□□□ -1.71
RHOP08100 RNU6-1316P-201ENST00000384242 108 ntBASIC4.34□□□□□ -1.71
RHOP08100 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 MIR1179-201ENST00000408703 91 ntBASIC4.34□□□□□ -1.71
RHOP08100 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 MTCO2P5-201ENST00000422621 426 ntBASIC4.34□□□□□ -1.71
RHOP08100 USP9YP36-201ENST00000424581 829 ntBASIC4.34□□□□□ -1.71
RHOP08100 AL451062.2-201ENST00000427515 271 ntBASIC4.34□□□□□ -1.71
RHOP08100 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RHOP08100 RPL22P17-201ENST00000438729 315 ntBASIC4.34□□□□□ -1.71
RHOP08100 RPL17P49-201ENST00000443728 411 ntBASIC4.34□□□□□ -1.71
RHOP08100 NFU1P2-201ENST00000448700 469 ntBASIC4.34□□□□□ -1.71
RHOP08100 PABPC1P3-201ENST00000469174 459 ntBASIC4.34□□□□□ -1.71
RHOP08100 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.34□□□□□ -1.71
RHOP08100 MTND1P3-201ENST00000484956 952 ntBASIC4.34□□□□□ -1.71
RHOP08100 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 AC117522.1-201ENST00000509821 380 ntBASIC4.34□□□□□ -1.71
RHOP08100 AC009646.1-201ENST00000510455 318 ntBASIC4.34□□□□□ -1.71
RHOP08100 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.34□□□□□ -1.71
RHOP08100 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
RHOP08100 Y_RNA.672-201ENST00000516289 104 ntBASIC4.34□□□□□ -1.71
RHOP08100 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.34□□□□□ -1.71
RHOP08100 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.34□□□□□ -1.71
RHOP08100 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.34□□□□□ -1.71
RHOP08100 MIR4444-1-201ENST00000581696 74 ntBASIC4.34□□□□□ -1.71
RHOP08100 MIR4444-2-201ENST00000584390 74 ntBASIC4.34□□□□□ -1.71
RHOP08100 MIR4719-201ENST00000585233 84 ntBASIC4.34□□□□□ -1.71
RHOP08100 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.34□□□□□ -1.71
RHOP08100 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.34□□□□□ -1.71
RHOP08100 AC002553.4-201ENST00000616896 331 ntBASIC4.34□□□□□ -1.71
RHOP08100 MIR6500-201ENST00000622700 86 ntBASIC4.34□□□□□ -1.71
RHOP08100 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RHOP08100 KPNA2P2-201ENST00000419546 1489 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms