Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MT-ND1P03886 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MT-ND1P03886 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MT-ND1P03886 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MT-ND1P03886 CDR1-202ENST00000625883 1485 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 SNRPEP3-201ENST00000338402 276 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 RNU2-28P-201ENST00000410457 189 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 RAP1BP1-201ENST00000412709 553 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AL356968.1-201ENST00000416622 474 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AC004975.1-201ENST00000428733 208 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 RPS29P7-201ENST00000439662 171 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.24□□□□□ -1.89
MT-ND1P03886 TRGVB-201ENST00000453257 471 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC007967.1-201ENST00000455422 1159 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 ANKRD26P4-201ENST00000455755 950 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 MTND1P16-201ENST00000465177 898 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 HMGB1P25-201ENST00000468402 607 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC023598.1-201ENST00000472521 361 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC096751.1-202ENST00000502691 1067 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.24□□□□□ -1.89
MT-ND1P03886 MTCYBP17-201ENST00000503579 789 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 MLLT10P2-201ENST00000506434 249 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 TXNP6-201ENST00000510190 310 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC107934.2-201ENST00000518653 310 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 MTND2P38-201ENST00000522536 667 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AP003461.1-201ENST00000528866 78 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC004024.1-201ENST00000549244 247 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC125611.1-201ENST00000549563 229 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 MIR4474-201ENST00000579189 78 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AC021171.1-201ENST00000603137 706 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AL031281.1-201ENST00000604049 488 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC010738.1-201ENST00000604970 987 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AL355810.1-201ENST00000614629 552 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.24□□□□□ -1.89
MT-ND1P03886 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AP003355.3-201ENST00000623465 114 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.24□□□□□ -1.89
MT-ND1P03886 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.24□□□□□ -1.89
MT-ND1P03886 AC007823.1-201ENST00000569932 1566 ntBASIC3.24□□□□□ -1.89
MT-ND1P03886 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MT-ND1P03886 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.24□□□□□ -1.89
MT-ND1P03886 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
MT-ND1P03886 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MT-ND1P03886 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
MT-ND1P03886 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.23□□□□□ -1.89
MT-ND1P03886 RPL7P26-201ENST00000333817 754 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MT-ND1P03886 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MT-ND1P03886 RNU6-1074P-201ENST00000383995 104 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 MIR506-201ENST00000384998 124 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 AC016769.3-201ENST00000396562 315 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 ARF4P3-201ENST00000397387 509 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MT-ND1P03886 SKINT1L-201ENST00000401057 817 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 CYCSP45-201ENST00000402289 315 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 AL591034.1-201ENST00000407447 340 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC012065.2-201ENST00000421295 375 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 RPL7P2-201ENST00000427639 268 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 ARF4P2-201ENST00000430209 526 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 RPS25P9-201ENST00000435591 252 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.23□□□□□ -1.89
MT-ND1P03886 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC104978.1-201ENST00000449387 391 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.23□□□□□ -1.89
MT-ND1P03886 NUTF2P7-201ENST00000453086 375 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 RPL18AP17-201ENST00000455326 198 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC010486.2-201ENST00000505572 483 ntBASIC3.23□□□□□ -1.89
MT-ND1P03886 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.23□□□□□ -1.89
MT-ND1P03886 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms