Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.48□□□□□ -1.85
PDGFBP01127 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.48□□□□□ -1.85
PDGFBP01127 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 KC877982.1-201ENST00000602313 470 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AL390838.2-201ENST00000602394 274 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 HMGB1P50-201ENST00000605814 607 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC091946.2-201ENST00000606105 291 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC106052.1-201ENST00000608029 497 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC024257.5-201ENST00000612739 531 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 MFSD8-245ENST00000641743 948 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 MAPK10-253ENST00000641010 4072 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.48□□□□□ -1.85
PDGFBP01127 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 AC118273.1-201ENST00000525324 3006 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PDGFBP01127 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.48□□□□□ -1.85
PDGFBP01127 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.47□□□□□ -1.85
PDGFBP01127 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 HSPA8P1-201ENST00000425843 1833 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PDGFBP01127 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 snoZ40.1-201ENST00000364540 72 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 RNU6-1074P-201ENST00000383995 104 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 SNORD51-201ENST00000384320 80 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 RNU6-878P-201ENST00000384578 110 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 RNU6-906P-201ENST00000384700 70 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.47□□□□□ -1.85
PDGFBP01127 RPL21P32-201ENST00000419877 477 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 Z80107.1-201ENST00000436830 412 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFBP01127 PNPLA4P1-201ENST00000458328 305 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 HMGB1P25-201ENST00000468402 607 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 OR2A20P-203ENST00000498397 1268 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AC110794.1-201ENST00000505816 425 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 FCF1P8-201ENST00000510322 597 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFBP01127 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC090502.2-201ENST00000549267 280 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFBP01127 MIR4760-201ENST00000585040 80 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.47□□□□□ -1.85
PDGFBP01127 AC093732.2-201ENST00000607950 274 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 AC068787.1-201ENST00000623908 691 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDGFBP01127 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PDGFBP01127 AL035425.3-201ENST00000564206 4996 ntBASIC3.47□□□□□ -1.85
PDGFBP01127 SGO1P2-201ENST00000429458 1589 ntBASIC3.46□□□□□ -1.85
PDGFBP01127 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PDGFBP01127 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PDGFBP01127 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 AP005901.5-201ENST00000545779 1796 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.46□□□□□ -1.86
PDGFBP01127 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFBP01127 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 AP000568.1-201ENST00000282964 442 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDGFBP01127 RNA5SP197-201ENST00000363357 119 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 SNORD65.1-201ENST00000390889 71 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 MIR1261-201ENST00000408659 82 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 RNA5SP306-201ENST00000411087 107 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AL161449.1-201ENST00000414531 1199 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 HMGB3P23-201ENST00000414981 585 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.46□□□□□ -1.86
PDGFBP01127 AL139413.1-201ENST00000421309 217 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.46□□□□□ -1.86
PDGFBP01127 RPL23AP69-201ENST00000431134 458 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 PTENP1-201ENST00000447117 1215 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 ZNF886P-201ENST00000450781 723 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 SSXP4-201ENST00000451349 245 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC092754.2-201ENST00000463506 460 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC096751.1-202ENST00000502691 1067 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC006390.1-201ENST00000508068 283 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 AC010460.2-201ENST00000509054 677 ntBASIC3.46□□□□□ -1.86
PDGFBP01127 RNU6-27P-201ENST00000516146 107 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms