Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 MIR491-201ENST00000384877 84 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 MTND4P13-201ENST00000402078 1023 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC073264.1-201ENST00000411508 416 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.34□□□□□ -2.03
CPSF4O95639 RPL31P2-201ENST00000413849 377 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC008280.1-201ENST00000418851 412 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.34□□□□□ -2.03
CPSF4O95639 AC010881.1-201ENST00000433830 235 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.34□□□□□ -2.03
CPSF4O95639 HSPE1P28-201ENST00000443139 211 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 HSFY3P-201ENST00000444242 1191 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.34□□□□□ -2.03
CPSF4O95639 GTF2IP12-201ENST00000456547 356 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 RPS15AP1-201ENST00000457423 391 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 RPL23AP45-201ENST00000476406 468 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 RPS4XP6-201ENST00000477670 797 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC012181.1-201ENST00000479895 423 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.34□□□□□ -2.03
CPSF4O95639 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
CPSF4O95639 AC112518.2-201ENST00000508565 425 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 RN7SKP282-201ENST00000516824 299 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 IGJP1-201ENST00000522682 475 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC104115.2-201ENST00000523026 687 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.34□□□□□ -2.03
CPSF4O95639 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CPSF4O95639 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.34□□□□□ -2.03
CPSF4O95639 GTF3AP2-201ENST00000557014 266 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC010653.1-201ENST00000571108 881 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 RPL23AP84-201ENST00000571193 464 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC098483.2-201ENST00000603158 454 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AL035413.2-201ENST00000604801 525 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 AC026741.1-201ENST00000605892 482 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.34□□□□□ -2.03
CPSF4O95639 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.34□□□□□ -2.03
CPSF4O95639 CYP3A51P-201ENST00000633513 256 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 CRYM-AS1-204ENST00000637983 556 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 MTND5P28-201ENST00000438005 1594 ntBASIC2.34□□□□□ -2.03
CPSF4O95639 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CPSF4O95639 AC110774.1-201ENST00000623567 2018 ntBASIC2.34□□□□□ -2.04
CPSF4O95639 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CPSF4O95639 MTCO1P4-201ENST00000520516 1409 ntBASIC2.34□□□□□ -2.04
CPSF4O95639 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 MTCO1P24-201ENST00000515438 1558 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CPSF4O95639 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 AL139039.1-201ENST00000401900 692 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 BX664727.1-201ENST00000416024 466 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 MTCO2P1-201ENST00000424648 477 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AL009174.1-201ENST00000426577 416 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 UBE2D3P3-201ENST00000426992 425 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.33□□□□□ -2.04
CPSF4O95639 CYCSP32-201ENST00000440548 321 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC025750.2-201ENST00000442609 450 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC017099.1-201ENST00000448261 1028 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AL590639.1-201ENST00000456484 337 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 HMGN2P16-201ENST00000456802 261 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CPSF4O95639 RPL32P14-201ENST00000463196 378 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 VN1R17P-201ENST00000472048 1090 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC087879.1-201ENST00000474343 374 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 RPS27AP1-201ENST00000475545 471 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.33□□□□□ -2.04
CPSF4O95639 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.33□□□□□ -2.04
CPSF4O95639 RNU6-488P-201ENST00000515918 99 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 HIGD1AP6-201ENST00000521833 279 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AP003049.1-201ENST00000529418 457 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.33□□□□□ -2.04
CPSF4O95639 OR5BN1P-201ENST00000532955 829 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.33□□□□□ -2.04
CPSF4O95639 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.33□□□□□ -2.04
CPSF4O95639 MIR3690-201ENST00000580266 75 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.33□□□□□ -2.04
CPSF4O95639 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.33□□□□□ -2.04
CPSF4O95639 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 AC131902.3-201ENST00000611767 581 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 AC092608.2-201ENST00000624427 218 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC006386.2-201ENST00000624491 75 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC106730.3-201ENST00000624568 641 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 AC012005.1-201ENST00000624575 75 ntBASIC2.33□□□□□ -2.04
CPSF4O95639 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CPSF4O95639 AC073055.1-201ENST00000456901 1621 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 RNA5SP295-201ENST00000362655 121 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 SNORA7.2-201ENST00000364446 145 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 MIR27B-201ENST00000385129 97 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CPSF4O95639 AP002784.2-201ENST00000397300 549 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 SNORA11-201ENST00000408789 128 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC246680.2-201ENST00000422106 389 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 AC005517.2-201ENST00000424673 553 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.32□□□□□ -2.04
CPSF4O95639 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CPSF4O95639 HMGB1P12-201ENST00000438594 598 ntBASIC2.32□□□□□ -2.04
CPSF4O95639 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms