Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 UBE2D3P1-201ENST00000436669 444 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.06□□□□□ -2.08
SNRNP200O75643 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP200O75643 AL445669.2-201ENST00000454425 421 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 TRBV26-201ENST00000456572 344 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 snoU13.15-201ENST00000459407 104 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP200O75643 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNRNP200O75643 AL163153.1-201ENST00000554223 283 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP200O75643 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SNRNP200O75643 AC244517.1-201ENST00000606030 2086 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 AL355578.1-201ENST00000607405 1328 ntBASIC2.06□□□□□ -2.08
SNRNP200O75643 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
SNRNP200O75643 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SNRNP200O75643 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 RNU6-50P-201ENST00000362356 103 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 RNU6-799P-201ENST00000363567 107 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 RNU6-253P-201ENST00000384730 105 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AL445529.1-201ENST00000398713 389 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 OOSP1P1-201ENST00000423265 274 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.05□□□□□ -2.08
SNRNP200O75643 AC098826.1-201ENST00000433943 471 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 RPL21P2-201ENST00000440049 481 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC011753.1-201ENST00000451001 220 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC107222.1-201ENST00000510899 637 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 AC084373.1-201ENST00000603311 235 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.05□□□□□ -2.08
SNRNP200O75643 AC010378.1-201ENST00000619270 362 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SNRNP200O75643 AP002907.1-201ENST00000606361 1430 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC093716.1-201ENST00000435923 377 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.05□□□□□ -2.08
SNRNP200O75643 TBCAP3-201ENST00000512475 312 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 RNU6-319P-201ENST00000516025 108 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.05□□□□□ -2.08
SNRNP200O75643 CENPUP2-201ENST00000555897 1186 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 MTCO3P24-201ENST00000572729 782 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 MIR3945-201ENST00000581853 98 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.05□□□□□ -2.08
SNRNP200O75643 AC009318.2-201ENST00000610917 651 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC104237.2-201ENST00000612456 443 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC004696.1-201ENST00000614345 607 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 AC244517.12-201ENST00000623581 663 ntBASIC2.05□□□□□ -2.08
SNRNP200O75643 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP200O75643 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.04□□□□□ -2.08
SNRNP200O75643 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.04□□□□□ -2.08
SNRNP200O75643 RNU1-91P-201ENST00000364746 163 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.04□□□□□ -2.08
SNRNP200O75643 CYCSP45-201ENST00000402289 315 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.04□□□□□ -2.08
SNRNP200O75643 AC096638.1-201ENST00000444678 216 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 CALM1P2-201ENST00000452941 448 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.04□□□□□ -2.08
SNRNP200O75643 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.04□□□□□ -2.08
SNRNP200O75643 SYF2P1-201ENST00000550658 413 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
SNRNP200O75643 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.04□□□□□ -2.08
SNRNP200O75643 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.04□□□□□ -2.08
SNRNP200O75643 AC096656.1-201ENST00000623826 1364 ntBASIC2.04□□□□□ -2.08
SNRNP200O75643 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SNRNP200O75643 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP200O75643 AC096533.1-201ENST00000411645 353 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 CBWD4P-201ENST00000445695 655 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 RPL23AP23-201ENST00000452590 471 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 MTCO3P11-201ENST00000455103 774 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 HMGN2P13-201ENST00000476476 274 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.03□□□□□ -2.08
SNRNP200O75643 SEM1P1-201ENST00000506694 209 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 SNORD59.2-201ENST00000516873 68 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.03□□□□□ -2.08
SNRNP200O75643 AC025281.1-201ENST00000567026 265 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 AC245517.5-201ENST00000611529 162 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 AC087241.4-201ENST00000612441 480 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.03□□□□□ -2.08
SNRNP200O75643 MIR4496-201ENST00000635896 61 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
SNRNP200O75643 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SNRNP200O75643 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SNRNP200O75643 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP200O75643 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP200O75643 AC021087.2-201ENST00000504656 1203 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
SNRNP200O75643 AC087373.1-201ENST00000524920 491 ntBASIC2.03□□□□□ -2.08
SNRNP200O75643 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.03□□□□□ -2.08
SNRNP200O75643 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.03□□□□□ -2.08
SNRNP200O75643 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SNRNP200O75643 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.02□□□□□ -2.09
SNRNP200O75643 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms