Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
USH2AO75445 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC0.96□□□□□ -2.26
USH2AO75445 RNU4-44P-201ENST00000363050 141 ntBASIC0.96□□□□□ -2.26
USH2AO75445 RNA5SP62-201ENST00000363457 110 ntBASIC0.96□□□□□ -2.26
USH2AO75445 RNU6-53P-201ENST00000365367 106 ntBASIC0.96□□□□□ -2.26
USH2AO75445 RNY1P4-201ENST00000384595 115 ntBASIC0.96□□□□□ -2.26
USH2AO75445 RPL31P12-201ENST00000422587 358 ntBASIC0.96□□□□□ -2.26
USH2AO75445 RN7SL75P-201ENST00000461926 281 ntBASIC0.96□□□□□ -2.26
USH2AO75445 AC011037.1-201ENST00000483964 558 ntBASIC0.96□□□□□ -2.26
USH2AO75445 MTAPP1-201ENST00000489154 819 ntBASIC0.96□□□□□ -2.26
USH2AO75445 AC019159.1-201ENST00000605094 187 ntBASIC0.96□□□□□ -2.26
USH2AO75445 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC0.96□□□□□ -2.26
USH2AO75445 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
USH2AO75445 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC0.96□□□□□ -2.26
USH2AO75445 AL450326.2-201ENST00000421913 1962 ntBASIC0.95□□□□□ -2.26
USH2AO75445 RNA5SP139-201ENST00000364340 117 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AL583834.1-201ENST00000406943 343 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AL158825.1-201ENST00000414735 521 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AL451074.5-201ENST00000415894 435 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AL606490.7-201ENST00000433136 191 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AC092473.1-201ENST00000441098 221 ntBASIC0.95□□□□□ -2.26
USH2AO75445 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC0.95□□□□□ -2.26
USH2AO75445 AC093767.1-201ENST00000504523 156 ntBASIC0.95□□□□□ -2.26
USH2AO75445 MIR5007-201ENST00000583098 95 ntBASIC0.95□□□□□ -2.26
USH2AO75445 MIR151B-201ENST00000584249 96 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC0.95□□□□□ -2.26
USH2AO75445 AC020633.1-201ENST00000468439 2247 ntBASIC0.95□□□□□ -2.26
USH2AO75445 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.95□□□□□ -2.26
USH2AO75445 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC0.95□□□□□ -2.26
USH2AO75445 HMGB1P1-201ENST00000522557 636 ntBASIC0.95□□□□□ -2.26
USH2AO75445 MIR5089-201ENST00000580047 84 ntBASIC0.95□□□□□ -2.26
USH2AO75445 SNRPGP19-201ENST00000603826 189 ntBASIC0.95□□□□□ -2.26
USH2AO75445 UBE2Q2P2-203ENST00000613592 761 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC0.95□□□□□ -2.26
USH2AO75445 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC0.95□□□□□ -2.26
USH2AO75445 AC126182.1-201ENST00000478134 357 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.95□□□□□ -2.26
USH2AO75445 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
USH2AO75445 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
USH2AO75445 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC0.95□□□□□ -2.26
USH2AO75445 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
USH2AO75445 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
USH2AO75445 ALDH7A1P3-201ENST00000492517 345 ntBASIC0.95□□□□□ -2.26
USH2AO75445 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC0.95□□□□□ -2.26
USH2AO75445 AC119751.1-201ENST00000513357 765 ntBASIC0.95□□□□□ -2.26
USH2AO75445 SCARNA16.3-201ENST00000516595 184 ntBASIC0.95□□□□□ -2.26
USH2AO75445 PTP4A1P6-201ENST00000531034 478 ntBASIC0.95□□□□□ -2.26
USH2AO75445 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC0.95□□□□□ -2.26
USH2AO75445 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
USH2AO75445 AL627390.1-201ENST00000396055 340 ntBASIC0.94□□□□□ -2.26
USH2AO75445 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.94□□□□□ -2.26
USH2AO75445 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 AL353597.2-202ENST00000434901 373 ntBASIC0.94□□□□□ -2.26
USH2AO75445 COX6CP2-201ENST00000444980 225 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 AC108734.3-201ENST00000481241 1165 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 AL359273.1-201ENST00000510918 627 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 FAM92A1P1-201ENST00000528023 890 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 PSMA6P4-201ENST00000603247 718 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AL512598.1-201ENST00000610158 273 ntBASIC0.94□□□□□ -2.26
USH2AO75445 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 SPATA2P1-201ENST00000431223 2055 ntBASIC0.94□□□□□ -2.26
USH2AO75445 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
USH2AO75445 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 OR6C64P-201ENST00000419708 825 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 AC021087.2-201ENST00000504656 1203 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 AC011712.1-201ENST00000588959 234 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
USH2AO75445 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 AC244517.1-201ENST00000606030 2086 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AL021407.1-201ENST00000404531 386 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC234782.4-201ENST00000417646 1048 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 Z99714.1-201ENST00000450463 807 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC117532.1-201ENST00000514638 323 ntBASIC0.94□□□□□ -2.26
USH2AO75445 RNA5SP436-201ENST00000516020 115 ntBASIC0.94□□□□□ -2.26
USH2AO75445 RNU6-1231P-201ENST00000517185 103 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 AL121821.2-201ENST00000556081 394 ntBASIC0.94□□□□□ -2.26
USH2AO75445 MTND4P35-201ENST00000604257 1375 ntBASIC0.94□□□□□ -2.26
USH2AO75445 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 ZNF355P-201ENST00000427301 3216 ntBASIC0.94□□□□□ -2.26
USH2AO75445 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
USH2AO75445 RN7SKP43-201ENST00000516173 320 ntBASIC0.94□□□□□ -2.26
USH2AO75445 RNU6-250P-201ENST00000516958 103 ntBASIC0.94□□□□□ -2.26
USH2AO75445 OR7K1P-201ENST00000546439 926 ntBASIC0.94□□□□□ -2.26
USH2AO75445 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC0.94□□□□□ -2.26
USH2AO75445 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC0.94□□□□□ -2.26
USH2AO75445 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms