Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 NACA3P-201ENST00000359690 648 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 SNORD9-201ENST00000362566 104 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 RNU6-1249P-201ENST00000363237 111 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 RNU5D-1-201ENST00000363299 116 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 Y_RNA.192-201ENST00000363977 102 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL136116.1-201ENST00000403591 381 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC068533.2-201ENST00000411872 306 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 YPEL5P1-201ENST00000419731 367 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRTM2O43300 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 USP9YP11-201ENST00000427537 717 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 CYCSP4-201ENST00000429682 331 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC241584.1-201ENST00000438469 1241 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC092393.1-201ENST00000439625 742 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC006480.1-201ENST00000449887 378 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 PNPLA4P1-201ENST00000458328 305 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AL136126.1-201ENST00000473603 402 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC010301.1-201ENST00000473936 355 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 HMGN2P13-201ENST00000476476 274 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 ACTG1P13-201ENST00000486987 1043 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 SETP14-201ENST00000497538 873 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC091951.3-201ENST00000504093 246 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 RNU6-1225P-201ENST00000516336 65 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 RN7SKP287-201ENST00000516546 266 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC027309.2-201ENST00000520566 192 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 TGIF1P1-201ENST00000558095 802 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
LRRTM2O43300 GAS5-AS1-201ENST00000602767 694 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 XIAPP1-201ENST00000603162 600 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 SNORA62.6-201ENST00000606322 83 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AC007349.4-201ENST00000608114 532 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
LRRTM2O43300 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.3□□□□□ -1.88
LRRTM2O43300 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRTM2O43300 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRTM2O43300 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM2O43300 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM2O43300 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRTM2O43300 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM2O43300 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRTM2O43300 ZNF542P-204ENST00000482727 1305 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRTM2O43300 RNU6-1066P-201ENST00000363573 105 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 MIR649-201ENST00000384843 97 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AL590084.1-201ENST00000407885 387 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AL450338.1-201ENST00000407987 512 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 RPS24P7-201ENST00000416921 246 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 GTF2IP23-201ENST00000423746 351 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRRTM2O43300 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM2O43300 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRTM2O43300 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM2O43300 COX7BP2-201ENST00000437976 242 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM2O43300 TXNP1-201ENST00000441872 371 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 PTENP1-201ENST00000447117 1215 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.29□□□□□ -1.88
LRRTM2O43300 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRTM2O43300 AL139824.2-201ENST00000458731 1095 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 RPS23P3-201ENST00000470993 430 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 RPL7P23-201ENST00000493874 747 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 MTCYBP35-201ENST00000503630 1137 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.29□□□□□ -1.88
LRRTM2O43300 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM2O43300 AC021146.8-201ENST00000507455 733 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.29□□□□□ -1.88
LRRTM2O43300 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.29□□□□□ -1.88
LRRTM2O43300 AC090136.1-201ENST00000520009 240 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 ARL2BPP5-201ENST00000523141 481 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AC005832.3-201ENST00000537929 631 ntBASIC3.29□□□□□ -1.88
LRRTM2O43300 AC024224.1-201ENST00000538284 609 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms