Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC068790.5-201ENST00000602741 355 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 LLPHP1-201ENST00000603571 367 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 RNU6-87P-201ENST00000607561 108 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.28□□□□□ -1.56
SRGAP3O43295 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.28□□□□□ -1.56
SRGAP3O43295 AL158801.5-201ENST00000623123 465 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.28□□□□□ -1.56
SRGAP3O43295 AP002907.1-201ENST00000606361 1430 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 LINC01109-201ENST00000603837 3081 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SRGAP3O43295 AL592182.3-201ENST00000642132 3304 ntBASIC5.28□□□□□ -1.56
SRGAP3O43295 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SRGAP3O43295 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SRGAP3O43295 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 AC005332.5-201ENST00000591222 2919 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 NMD3P1-201ENST00000439704 1488 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 RNU1-15P-201ENST00000353977 144 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SRGAP3O43295 RNU4-44P-201ENST00000363050 141 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 Y_RNA.159-201ENST00000363674 87 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 Y_RNA.326-201ENST00000365176 113 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.27□□□□□ -1.57
SRGAP3O43295 Y_RNA.394-201ENST00000383942 103 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 MRPL42P2-201ENST00000403169 426 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AL356432.1-201ENST00000405809 419 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.27□□□□□ -1.57
SRGAP3O43295 PDCL2P1-201ENST00000419302 352 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.27□□□□□ -1.57
SRGAP3O43295 RBMY1KP-201ENST00000423480 476 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPL23AP38-201ENST00000423801 469 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 COX6B1P7-201ENST00000430845 235 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC010881.1-201ENST00000433830 235 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPS26P40-201ENST00000435209 294 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.27□□□□□ -1.57
SRGAP3O43295 NIPA2P5-201ENST00000452282 464 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.27□□□□□ -1.57
SRGAP3O43295 AC079804.1-201ENST00000461922 436 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPL7AP28-201ENST00000464513 571 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPS15AP17-201ENST00000470598 390 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPS29P19-201ENST00000479709 171 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 RPL36AP51-201ENST00000487216 318 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 NIPA2P2-201ENST00000496376 1083 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 AC114967.1-201ENST00000504890 259 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 IGLV3-26-201ENST00000520756 302 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 MAGOH2P-202ENST00000584384 429 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.27□□□□□ -1.57
SRGAP3O43295 AC008687.2-201ENST00000597865 520 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.27□□□□□ -1.57
SRGAP3O43295 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 AL023881.1-201ENST00000621088 301 ntBASIC5.27□□□□□ -1.57
SRGAP3O43295 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SRGAP3O43295 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.27□□□□□ -1.57
SRGAP3O43295 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SRGAP3O43295 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.26□□□□□ -1.57
SRGAP3O43295 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AC010300.1-201ENST00000600671 5134 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 FRG1BP-201ENST00000278882 761 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 FRG1CP-201ENST00000358464 769 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 Y_RNA.419-201ENST00000384041 102 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 RNU2-8P-201ENST00000410727 190 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 RSL24D1P6-201ENST00000426934 401 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 MTCO2P12-201ENST00000427426 682 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.26□□□□□ -1.57
SRGAP3O43295 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SRGAP3O43295 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 SNORA31.9-201ENST00000516429 84 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 MRPL49P2-201ENST00000521066 465 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 AC022690.1-201ENST00000526681 550 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.26□□□□□ -1.57
SRGAP3O43295 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AC018638.8-201ENST00000588755 281 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.26□□□□□ -1.57
SRGAP3O43295 AC005858.4-201ENST00000623191 700 ntBASIC5.26□□□□□ -1.57
SRGAP3O43295 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms