Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-202P-201ENST00000515998 96 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC023632.4-201ENST00000517783 191 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGB3O15347 MED28P6-201ENST00000558776 231 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC090616.3-201ENST00000582184 217 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 CBX3P2-202ENST00000583365 535 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB3O15347 MIR6748-201ENST00000610433 71 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC107905.1-201ENST00000616204 426 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB3O15347 AC068880.5-201ENST00000624331 290 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AL109659.3-201ENST00000624985 950 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 MIR3651-201ENST00000630427 90 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AC008669.1-201ENST00000565823 2178 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 MTCO1P12-201ENST00000414273 1543 ntBASIC2.12□□□□□ -2.07
HMGB3O15347 AP000526.1-201ENST00000603308 1388 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 RNU6-543P-201ENST00000362576 108 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 RNVU1-3-201ENST00000364313 161 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGB3O15347 CYCSP45-201ENST00000402289 315 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC080125.1-201ENST00000414888 684 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGB3O15347 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB3O15347 UBE2V1P5-201ENST00000440070 405 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 RAB11AP1-201ENST00000442978 646 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC103987.1-201ENST00000473394 348 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC015724.1-201ENST00000478577 156 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC114322.1-201ENST00000506771 926 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 HMGB3P3-201ENST00000510526 400 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC100870.1-201ENST00000522035 505 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC087272.1-201ENST00000523624 533 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGB3O15347 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGB3O15347 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB3O15347 FAM60BP-201ENST00000578364 658 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 MIR4635-201ENST00000583759 79 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC079610.2-201ENST00000604818 690 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AC073968.1-201ENST00000618594 637 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HMGB3O15347 AL353748.2-201ENST00000622148 471 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGB3O15347 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.11□□□□□ -2.07
HMGB3O15347 AC087359.1-201ENST00000508335 1740 ntBASIC2.11□□□□□ -2.07
HMGB3O15347 AL049780.3-201ENST00000624612 1583 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RNA5SP479-201ENST00000364858 117 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RNU6-441P-201ENST00000384545 106 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RNU6-1151P-201ENST00000384684 107 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGB3O15347 RNU6-272P-201ENST00000411028 104 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB3O15347 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGB3O15347 MTCO1P39-201ENST00000426148 480 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AL159987.2-201ENST00000432754 307 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC010881.1-201ENST00000433830 235 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC129850.1-201ENST00000436203 508 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RPS15AP7-201ENST00000439294 405 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC112653.1-201ENST00000443851 386 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 AL513328.1-201ENST00000446460 224 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC004022.1-201ENST00000447766 1066 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 DPPA3P1-201ENST00000448050 469 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 MORF4L1P4-201ENST00000450245 976 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 NAP1L1P3-201ENST00000462291 880 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RN7SL542P-201ENST00000467147 294 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 PRELID3BP5-201ENST00000508612 460 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 AC006445.2-201ENST00000510061 472 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 RNU6-889P-201ENST00000517189 103 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB3O15347 AC106785.1-201ENST00000565935 262 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 MIR4443-201ENST00000585052 53 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 AC024153.1-201ENST00000603103 365 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 MIR7112-201ENST00000616126 65 ntBASIC2.1□□□□□ -2.07
HMGB3O15347 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMGB3O15347 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB3O15347 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HMGB3O15347 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HMGB3O15347 MTND4P1-201ENST00000457501 1466 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGB3O15347 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HMGB3O15347 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.07
HMGB3O15347 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB3O15347 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.09□□□□□ -2.07
HMGB3O15347 AL389915.1-201ENST00000422463 466 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms